Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 2.4e-303 1044.6 507 100.0
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 1.5e-148 530.4 295 85.8
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 3.7e-147 525.8 294 85.4
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 6.0e-129 465.3 286 75.5
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 4.3e-127 459.1 298 74.5
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.3e-125 453.4 283 76.3
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 8.9e-125 451.4 283 76.0
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 4.4e-124 449.1 277 74.4
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 7.5e-124 448.4 268 76.5
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 7.5e-124 448.4 303 70.3
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 3.7e-123 446.0 303 70.0
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 4.9e-123 445.7 291 71.5
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 4.9e-123 445.7 288 71.2
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 8.3e-123 444.9 291 71.8
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 1.4e-122 444.1 288 74.3
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 1.4e-122 444.1 303 70.0
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.4e-122 444.1 283 72.8
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 4.1e-122 442.6 288 72.2
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.6e-121 440.7 289 71.3
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 2.1e-121 440.3 287 71.8
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 3.5e-121 439.5 299 70.2
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 7.8e-121 438.3 298 69.5
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.0e-120 438.0 288 70.5
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 2.3e-120 436.8 287 71.4
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 2.3e-120 436.8 289 70.6
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.1e-119 434.5 319 67.1
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.5e-119 434.1 303 68.3
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 1.5e-119 434.1 288 71.2
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 1.9e-119 433.7 298 69.1
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 2.5e-119 433.3 288 70.1
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 9.5e-119 431.4 291 68.7
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 2.1e-118 430.3 298 69.1
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 6.2e-118 428.7 296 70.3
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 8.1e-118 428.3 304 67.4
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 1.1e-117 427.9 302 68.9
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 1.4e-117 427.6 290 69.0
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.8e-117 427.2 296 67.6
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.5e-116 424.1 282 69.9
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 2.6e-116 423.3 278 70.9
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 2.6e-116 423.3 271 72.0
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 9.9e-116 421.4 289 70.2
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.3e-115 421.0 296 69.9
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.7e-115 420.6 306 65.7
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 4.9e-115 419.1 270 72.2
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 6.4e-115 418.7 278 70.1
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 8.4e-115 418.3 297 67.0
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 8.4e-115 418.3 295 69.8
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 2.4e-114 416.8 290 67.6
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 7.1e-114 415.2 289 68.5
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 9.2e-114 414.8 291 66.7
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.2e-113 414.5 314 63.7
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 3.5e-113 412.9 292 68.5
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.0e-112 411.4 295 66.4
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.0e-112 411.4 298 66.1
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 1.3e-112 411.0 294 66.7
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 1.7e-112 410.6 300 66.0
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 5.1e-112 409.1 296 65.5
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 1.9e-111 407.1 271 71.6
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.9e-111 407.1 321 62.9
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 7.3e-111 405.2 289 66.4
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 1.2e-110 404.4 400 52.2
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 1.6e-110 404.1 287 68.3
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 3.6e-110 402.9 299 65.2
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 4.7e-110 402.5 281 67.3
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.1e-109 401.4 299 64.9
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.4e-109 401.0 289 66.8
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 1.2e-108 397.9 274 66.1
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.2e-108 397.9 290 65.5
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 2.6e-108 396.7 283 66.1
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 2.2e-107 393.7 319 62.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 3.8e-107 392.9 304 65.1
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 1.1e-106 391.3 295 66.1
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 3.5e-105 386.3 295 65.4
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 4.6e-105 386.0 266 69.5
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 1.0e-104 384.8 324 59.0
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 1.3e-104 384.4 274 66.4
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 2.0e-100 370.5 282 62.8
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.7e-97 360.1 288 62.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 6.0e-97 359.0 287 59.9
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.3e-94 351.3 292 58.9
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 3.4e-92 343.2 338 54.7
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 3.8e-91 339.7 310 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 3.5e-89 333.2 293 54.3
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 1.1e-87 328.2 281 56.6
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 6.9e-85 318.9 243 63.8
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 3.5e-81 306.6 285 54.7
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 5.7e-79 299.3 227 66.1
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 6.3e-78 295.8 187 75.4
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 1.3e-75 288.1 184 71.2
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 1.2e-73 281.6 172 75.0
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 2.5e-71 273.9 176 74.4
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 3.3e-71 273.5 178 73.6
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.1e-69 266.9 172 70.3
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.5e-68 264.6 274 47.4
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.1e-66 258.5 271 51.3
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 1.9e-66 257.7 164 72.6
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 4.1e-61 240.0 291 42.3
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.3e-59 235.0 285 44.2
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 4.7e-57 226.5 173 62.4
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 5.3e-53 213.0 130 77.7
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 1.6e-52 211.5 158 61.4
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 4.0e-48 196.8 143 67.1
ECA233G0855 Erigeron canadensis HOM05D003964 ORTHO05D000174 9.4e-42 175.6 97 88.7
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 9.8e-31 139.0 69 82.6
ECA240G1473 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.7e-30 138.3 180 41.7
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.7e-30 137.1 81 74.1
ECA246G2956 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.1e-29 135.6 180 40.6
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 2.4e-29 134.4 330 29.7
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-29 133.3 183 38.3
ECA236G2182 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.5e-28 130.6 183 39.9
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.7e-27 128.3 280 34.3
ECA240G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 6.6e-27 126.3 180 38.9
ECA238G2404 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.6e-26 123.2 180 37.8
ECA240G4108 Erigeron canadensis HOM05D003964 ORTHO05D002376 7.3e-26 122.9 184 37.0
ECA234G2462 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-25 121.7 180 37.8
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.6e-25 121.7 85 65.9
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 6.8e-24 116.3 56 89.3
ECA248G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.2e-23 115.5 176 38.1
ECA238G3300 Erigeron canadensis HOM05D003964 ORTHO05D000174 2.9e-22 110.9 181 34.3
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 5.4e-21 106.7 182 35.2
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 7.8e-20 102.8 136 41.2
ECA233G5850 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.0e-19 102.4 101 49.5
ECA234G0749 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.0e-19 102.4 181 35.4
ECA234G0608 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.7e-19 101.7 180 34.4
ECA233G0385 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.9e-19 100.5 137 40.1
ECA248G0780 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.2e-17 95.5 180 33.3
ECA248G0798 Erigeron canadensis HOM05D003964 ORTHO05D000174 8.9e-16 89.4 127 46.5
ECA314G0004 Erigeron canadensis HOM05D003964 ORTHO05D000174 2.6e-15 87.8 144 42.4
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 7.5e-15 86.3 154 41.6
ECA238G2764 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.7e-14 85.1 180 32.8
ECA238G1979 Erigeron canadensis HOM05D003964 ORTHO05D000174 2.9e-14 84.3 143 41.3
ECA246G3631 Erigeron canadensis HOM05D003964 ORTHO05D000174 2.7e-12 77.8 111 42.3
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 1.5e-10 72.0 156 34.6
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 4.3e-10 70.5 65 49.2
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 7.3e-10 69.7 241 23.2
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.3e-10 69.7 71 49.3
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-09 68.9 177 31.6
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 1.2e-09 68.9 368 23.6
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 1.5e-07 62.0 148 28.4
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 1.5e-07 62.0 157 29.3
BolC4t26647H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-06 56.6 152 24.3


User provided reference genes

Program Settings