Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1001 Erigeron canadensis HOM05D003556 ORTHO05D003404 2.7e-104 382.1 203 100.0
Lsat_1_v5_gn_6_4280 Lactuca sativa HOM05D003556 ORTHO05D003404 6.8e-60 234.6 197 62.9
Lsat_1_v5_gn_6_32601 Lactuca sativa HOM05D002022 ORTHO05D002056 1.0e-23 114.4 99 60.6
Lj2A1197T77 Lonicera japonica HOM05D003556 ORTHO05D003404 8.8e-15 84.7 207 32.9
Rhsim13G0008900 Rhododendron simsii HOM05D003556 ORTHO05D003404 4.3e-14 82.4 159 33.3
THA.LOC104825958 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 9.1e-12 74.7 148 37.2
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 1.3e-10 70.9 195 29.7
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 3.8e-10 69.3 163 29.4
Cpa.g.sc151.17 Carica papaya HOM05D003556 ORTHO05D003404 3.8e-10 69.3 160 31.2
BcaB01g02439 Brassica carinata HOM05D003556 ORTHO05D003404 5.0e-10 68.9 145 34.5
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 6.5e-10 68.6 157 30.6
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 6.5e-10 68.6 160 32.5
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 8.5e-10 68.2 155 30.3
BraA03t12291Z Brassica rapa HOM05D003556 ORTHO05D003404 1.1e-09 67.8 166 32.5
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.4e-09 67.4 195 28.7
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 1.4e-09 67.4 156 31.4
A03p31140 Brassica napus HOM05D003556 ORTHO05D003404 1.9e-09 67.0 166 32.5
BcaC01g06767 Brassica carinata HOM05D003556 ORTHO05D003404 3.2e-09 66.2 145 33.1
C03p37950 Brassica napus HOM05D003556 ORTHO05D003404 3.2e-09 66.2 145 33.1
BolC3t16082H Brassica oleracea HOM05D003556 ORTHO05D003404 3.2e-09 66.2 145 33.1
Potri.001G127500 Populus trichocarpa HOM05D003556 ORTHO05D003404 4.2e-09 65.9 188 28.7
Aa31LG10G420 Aethionema arabicum HOM05D003556 ORTHO05D003404 5.5e-09 65.5 157 32.5
Sp6g02140 Schrenkiella parvula HOM05D003556 ORTHO05D003404 5.5e-09 65.5 145 33.1
BcaC03g16110 Brassica carinata HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BcaC04g24050 Brassica carinata HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
A02p24580 Brassica napus HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
A09p01710 Brassica napus HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
C02p38810 Brassica napus HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
C09p01780 Brassica napus HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BolC2t09897H Brassica oleracea HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BolC9t53113H Brassica oleracea HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BraA02t07448Z Brassica rapa HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BraA09t35826Z Brassica rapa HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
Thhalv10029000m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 9.4e-09 64.7 145 33.1
BcaB01g02062 Brassica carinata HOM05D003556 ORTHO05D003404 1.2e-08 64.3 145 33.1
Carub.0006s3492 Capsella rubella HOM05D003556 ORTHO05D003404 2.7e-08 63.2 148 31.8
AL1G63880 Arabidopsis lyrata HOM05D003556 ORTHO05D003404 3.6e-08 62.8 159 30.8
Thhalv10012280m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 3.6e-08 62.8 156 30.8
BcaC08g44217 Brassica carinata HOM05D003556 ORTHO05D003404 4.7e-08 62.4 158 32.9
C06p16220 Brassica napus HOM05D003556 ORTHO05D003404 4.7e-08 62.4 158 32.9
BolC6t36819H Brassica oleracea HOM05D003556 ORTHO05D003404 4.7e-08 62.4 158 32.9
BcaB02g10800 Brassica carinata HOM05D003556 ORTHO05D003404 6.1e-08 62.0 159 33.3
CARHR250460 Cardamine hirsuta HOM05D003556 ORTHO05D003404 7.9e-08 61.6 145 32.4
Cfa005888 Carpinus fangiana HOM05D003556 ORTHO05D003404 7.9e-08 61.6 205 29.8
Dinv33067 Davidia involucrata HOM05D003556 ORTHO05D003404 7.9e-08 61.6 196 28.1
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 7.9e-08 61.6 161 27.3
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 1.0e-07 61.2 172 28.5
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.4e-07 60.8 156 30.1
A05p17320 Brassica napus HOM05D003556 ORTHO05D003404 2.3e-07 60.1 159 33.3
BraA05t20629Z Brassica rapa HOM05D003556 ORTHO05D003404 3.0e-07 59.7 158 32.9
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 3.0e-07 59.7 157 30.6
AL6G50890 Arabidopsis lyrata HOM05D003556 ORTHO05D003404 3.9e-07 59.3 145 31.0
A06p00030 Brassica napus HOM05D003556 ORTHO05D003404 8.8e-07 58.2 157 29.9
BraA06t23219Z Brassica rapa HOM05D003556 ORTHO05D003404 8.8e-07 58.2 157 29.9
Cfa005889 Carpinus fangiana HOM05D003556 ORTHO05D003404 8.8e-07 58.2 156 30.8
Haze_04963 Corylus avellana HOM05D003556 ORTHO05D003404 8.8e-07 58.2 156 30.8
BcaB05g23608 Brassica carinata HOM05D003556 ORTHO05D003404 1.1e-06 57.8 145 30.3
CARHR045450 Cardamine hirsuta HOM05D003556 ORTHO05D003404 1.5e-06 57.4 156 30.1
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.3e-06 56.2 183 26.8
BolC3t21618H Brassica oleracea HOM05D003556 ORTHO05D003404 5.7e-06 55.5 154 29.2
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 7.4e-06 55.1 166 27.1
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 7.4e-06 55.1 166 27.1
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 9.7e-06 54.7 153 26.1


User provided reference genes

Program Settings