Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 0.0e+00 1094.7 514 100.0
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 6.6e-301 1036.6 514 93.4
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.2e-288 995.0 513 88.9
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 3.0e-269 931.4 514 82.7
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.2e-265 919.5 514 80.4
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 2.0e-265 918.7 514 80.4
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 4.4e-265 917.5 514 80.7
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 7.6e-265 916.8 514 80.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 3.2e-263 911.4 514 81.5
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 2.1e-262 908.7 514 79.8
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.1e-262 908.7 514 78.4
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 2.1e-262 908.7 514 80.0
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 2.7e-262 908.3 514 80.4
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 7.8e-262 906.7 514 79.2
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 6.6e-261 903.7 514 80.0
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 8.7e-261 903.3 514 79.2
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 9.6e-260 899.8 514 79.4
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.3e-259 899.4 514 79.4
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 2.1e-259 898.7 514 78.6
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 2.8e-259 898.3 514 79.4
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 4.8e-259 897.5 514 79.2
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 6.2e-259 897.1 514 78.6
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.4e-258 896.0 514 78.2
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 5.3e-258 894.0 514 78.6
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 1.5e-257 892.5 514 78.8
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 2.6e-257 891.7 514 77.6
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 2.6e-257 891.7 514 77.6
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.6e-257 891.7 514 77.6
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 2.6e-257 891.7 514 78.6
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 2.2e-256 888.6 514 78.0
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 3.8e-256 887.9 514 78.2
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 6.4e-256 887.1 514 77.8
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 8.4e-256 886.7 514 77.2
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 1.1e-255 886.3 514 78.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 1.9e-255 885.6 514 77.4
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 2.4e-255 885.2 514 77.6
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 3.2e-255 884.8 537 75.8
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 3.2e-255 884.8 514 78.6
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 9.3e-255 883.2 514 77.4
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 1.6e-254 882.5 514 77.2
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 2.1e-254 882.1 514 76.7
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 2.7e-254 881.7 514 77.2
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.6e-254 880.9 559 72.3
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.3e-253 879.4 514 76.1
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.8e-253 879.0 514 77.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.3e-253 878.6 514 77.0
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 3.0e-253 878.2 514 76.3
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 3.0e-253 878.2 514 77.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 3.0e-253 878.2 574 72.6
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 8.7e-253 876.7 514 77.0
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.5e-252 875.9 514 77.0
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.9e-252 875.5 513 76.8
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 7.4e-252 873.6 514 76.1
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 7.4e-252 873.6 514 76.8
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.6e-251 872.5 576 70.3
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 2.8e-251 871.7 513 75.8
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 3.7e-251 871.3 514 75.7
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 8.1e-251 870.2 525 77.9
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.1e-250 869.8 514 77.4
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.8e-250 869.0 540 74.8
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 1.8e-250 869.0 570 70.7
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.5e-249 865.9 535 73.8
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 2.0e-249 865.5 553 72.9
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 4.9e-248 860.9 522 76.2
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 6.4e-248 860.5 544 73.3
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 2.7e-246 855.1 514 74.9
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 3.0e-245 851.7 514 75.3
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 8.7e-245 850.1 479 81.4
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 8.7e-245 850.1 514 74.3
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.3e-243 846.3 514 75.3
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 3.7e-243 844.7 524 73.3
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.4e-242 842.8 514 75.1
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.5e-241 839.3 517 74.3
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 8.4e-240 833.6 514 73.5
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.1e-239 833.2 467 80.5
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 2.5e-236 822.0 486 77.4
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 2.4e-234 815.5 514 73.0
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 8.5e-232 807.0 724 57.5
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.4e-231 806.2 514 73.7
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 5.7e-228 794.3 514 72.8
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.8e-226 789.3 517 69.4
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.2e-225 786.6 674 58.8
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.2e-225 786.6 464 76.1
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 5.9e-225 784.3 516 69.0
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.3e-224 783.1 432 81.5
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 2.4e-218 762.3 514 69.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 1.5e-217 759.6 514 69.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.4e-202 709.9 516 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.5e-201 704.9 469 68.9
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 1.1e-191 673.7 369 81.6
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 3.6e-190 668.7 449 71.7
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 5.6e-183 644.8 520 58.5
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 4.3e-167 592.0 400 66.5
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 4.3e-167 592.0 556 53.6
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.1e-165 585.9 441 62.6
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.1e-154 550.8 504 53.4
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.2e-154 549.3 527 50.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 4.4e-148 528.9 529 48.0
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 6.0e-137 491.9 322 71.1
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 7.4e-119 431.8 313 66.8
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.5e-103 380.9 399 50.9
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 9.1e-101 371.7 201 82.1
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 6.5e-99 365.5 202 79.2
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.7e-97 360.1 228 72.4
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 4.7e-81 306.2 172 78.5
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.2e-64 249.6 146 75.3
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.7e-62 244.6 150 72.0
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 3.5e-60 236.9 147 73.5
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 7.8e-60 235.7 146 73.3
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.4e-55 219.9 120 83.3
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.1e-53 215.3 150 68.0
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 5.1e-43 179.9 111 73.0
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-34 152.1 127 63.0
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 8.1e-33 146.0 82 75.6
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.3e-32 143.3 127 59.8
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.4e-30 136.3 81 76.5
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.9e-24 116.3 112 56.2
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.9e-24 116.3 112 56.2
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.6e-20 103.6 80 67.5
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 1.7e-14 85.1 46 80.4
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 1.7e-14 85.1 51 76.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.9e-13 81.6 45 77.8
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.5e-10 71.2 41 80.5
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.3e-09 68.9 59 59.3
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.1e-09 68.2 40 77.5
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.1e-09 68.2 40 77.5
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 1.0e-06 59.3 53 49.1
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 1.0e-06 59.3 56 53.6
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.5e-06 56.6 34 76.5


User provided reference genes

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