Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0821 Erigeron canadensis HOM05D004603 ORTHO05D005244 3.7e-70 268.1 133 100.0
ECA248G3322 Erigeron canadensis HOM05D004603 ORTHO05D005244 1.7e-51 206.1 105 99.0
HanXRQChr13g0394011 Helianthus annuus HOM05D004603 ORTHO05D005244 2.6e-23 112.5 104 56.7
HanXRQChr15g0493861 Helianthus annuus HOM05D004603 ORTHO05D005244 2.2e-22 109.4 103 56.3
Lsat_1_v5_gn_1_97861 Lactuca sativa HOM05D004603 ORTHO05D005244 1.1e-13 80.5 103 46.6
Gohir.D04G071400 Gossypium hirsutum HOM05D004603 ORTHO05D005244 1.8e-13 79.7 99 49.5
Gorai.012G080400 Gossypium raimondii HOM05D004603 ORTHO05D005244 1.8e-13 79.7 99 49.5
Dinv32050 Davidia involucrata HOM05D004603 ORTHO05D005244 4.1e-13 78.6 98 44.9
Eucgr.G03257 Eucalyptus grandis HOM05D004603 ORTHO05D005244 2.0e-12 76.3 98 41.8
Ciclev10032728m.g Citrus clementina HOM05D004603 ORTHO05D005244 2.7e-12 75.9 98 45.9
COL.COLO4_25832 Corchorus olitorius HOM05D004603 ORTHO05D005244 2.7e-12 75.9 105 41.9
Duzib114G1022 Durio zibethinus HOM05D004603 ORTHO05D005244 4.5e-12 75.1 100 43.0
Gohir.A05G333100 Gossypium hirsutum HOM05D004603 ORTHO05D005244 4.5e-12 75.1 99 47.5
Lj1A1244T16 Lonicera japonica HOM05D004603 ORTHO05D005244 4.5e-12 75.1 94 41.5
Manes.11G002700 Manihot esculenta HOM05D004603 ORTHO05D005244 4.5e-12 75.1 103 43.7
Rhsim07G0062700 Rhododendron simsii HOM05D004603 ORTHO05D005244 5.9e-12 74.7 96 41.7
Actinidia21527 Actinidia chinensis HOM05D004603 ORTHO05D005244 7.8e-12 74.3 137 34.3
Ca_14312_v3 Cicer arietinum L. HOM05D004603 ORTHO05D005244 1.0e-11 73.9 94 42.6
COL.COLO4_29439 Corchorus olitorius HOM05D004603 ORTHO05D005244 2.3e-11 72.8 93 45.2
Lj9A646T46 Lonicera japonica HOM05D004603 ORTHO05D005244 3.9e-11 72.0 94 40.4
DCAR_031824 Daucus carota HOM05D004603 ORTHO05D005244 6.6e-11 71.2 99 42.4
Phvul.010G125900 Phaseolus vulgaris HOM05D004603 ORTHO05D005244 1.1e-10 70.5 98 41.8
Cpa.g.sc197.6 Carica papaya HOM05D004603 ORTHO05D005244 1.5e-10 70.1 93 41.9
Migut.B01205 Erythranthe guttata HOM05D004603 ORTHO05D005244 1.5e-10 70.1 90 43.3
vmacro13728 Vaccinium macrocarpon HOM05D004603 ORTHO05D005244 1.5e-10 70.1 96 41.7
GSVIVG01022405001 Vitis vinifera HOM05D004603 ORTHO05D005244 2.5e-10 69.3 98 39.8
Potri.001G024000 Populus trichocarpa HOM05D004603 ORTHO05D005244 3.3e-10 68.9 98 42.9
Atru.chr11.2466 Acer truncatum HOM05D004603 ORTHO05D005244 4.3e-10 68.6 98 40.8
Atru.chr11.2495 Acer truncatum HOM05D004603 ORTHO05D005244 4.3e-10 68.6 98 40.8
CSS0012283 Camellia sinensis var. sinensis HOM05D004603 ORTHO05D005244 4.3e-10 68.6 93 41.9
VMungo1127G1982 Vigna mungo HOM05D004603 ORTHO05D005244 4.3e-10 68.6 98 39.8
Ciclev10017990m.g Citrus clementina HOM05D004603 ORTHO05D005244 5.6e-10 68.2 98 41.8
Haze_03089 Corylus avellana HOM05D004603 ORTHO05D005244 5.6e-10 68.2 95 42.1
TWI38G0287 Tripterygium wilfordii HOM05D004603 ORTHO05D005244 5.6e-10 68.2 97 40.2
EL10Ac2g02852 Beta vulgaris HOM05D004603 ORTHO05D005244 7.3e-10 67.8 97 40.2
CSS0050281 Camellia sinensis var. sinensis HOM05D004603 ORTHO05D005244 7.3e-10 67.8 93 41.9
Duzib128G1390 Durio zibethinus HOM05D004603 ORTHO05D005244 7.3e-10 67.8 100 40.0
CANSAT35G1099 Cannabis sativa HOM05D004603 ORTHO05D005244 9.5e-10 67.4 96 43.8
Cfa010862 Carpinus fangiana HOM05D004603 ORTHO05D005244 9.5e-10 67.4 96 41.7
CiPaw.14G006000 Carya illinoinensis HOM05D004603 ORTHO05D005244 9.5e-10 67.4 94 41.5
Glyma.11G113600 Glycine max HOM05D004603 ORTHO05D005244 9.5e-10 67.4 98 39.8
Thecc.10G006000 Theobroma cacao HOM05D004603 ORTHO05D005244 9.5e-10 67.4 104 40.4
CiPaw.13G010800 Carya illinoinensis HOM05D004603 ORTHO05D005244 1.2e-09 67.0 96 42.7
Potri.003G201500 Populus trichocarpa HOM05D004603 ORTHO05D005244 1.6e-09 66.6 96 38.5
VMungo1127G0155 Vigna mungo HOM05D004603 ORTHO05D005244 1.6e-09 66.6 98 40.8
QL04p013733 Quercus lobata HOM05D004603 ORTHO05D005244 2.1e-09 66.2 94 43.6
Sabra01G0018000 Salix brachista HOM05D004603 ORTHO05D005244 2.8e-09 65.9 98 41.8
TPR.G3881 Trifolium pratense HOM05D004603 ORTHO05D005244 2.8e-09 65.9 97 40.2
Hma1.2p1_0902F.1_g234830 Hydrangea macrophylla HOM05D004603 ORTHO05D005244 3.6e-09 65.5 98 36.7
Oeu062071.1 Olea europaea HOM05D004603 ORTHO05D005244 6.1e-09 64.7 93 40.9
PGR031G2747 Punica granatum HOM05D004603 ORTHO05D005244 6.1e-09 64.7 97 40.2
TAR053G0004 Trochodendron aralioides HOM05D004603 ORTHO05D005244 6.1e-09 64.7 96 41.7
FAN03G3254 Fragaria x ananassa HOM05D004603 ORTHO05D005244 1.4e-08 63.5 100 39.0
Medtr4g071040 Medicago truncatula HOM05D004603 ORTHO05D005244 1.8e-08 63.2 94 37.2
MSTRG.20534 Avicennia marina HOM05D004603 ORTHO05D005244 2.3e-08 62.8 93 38.7
Ca_20912_v3 Cicer arietinum L. HOM05D004603 ORTHO05D005244 2.3e-08 62.8 89 39.3
Glyma.12G039500 Glycine max HOM05D004603 ORTHO05D005244 3.1e-08 62.4 98 37.8
FAN06G0782 Fragaria x ananassa HOM05D000001 ORTHO05D009083 4.0e-08 62.0 100 38.0
FAN01G0231 Fragaria x ananassa HOM05D000001 ORTHO05D009083 6.8e-08 61.2 100 38.0
FAN10G0154 Fragaria x ananassa HOM05D004603 ORTHO05D005244 6.8e-08 61.2 100 38.0
Lj2g0001718 Lotus japonicus HOM05D004603 ORTHO05D005244 6.8e-08 61.2 94 40.4
RcHm_v2.0_Chr1g0319701 Rosa chinensis HOM05D004603 ORTHO05D005244 6.8e-08 61.2 98 38.8
AUR62037226 Chenopodium quinoa HOM05D004603 ORTHO05D005244 8.9e-08 60.8 106 35.8
BraA09t38742Z Brassica rapa HOM05D000499 ORTHO05D002825 1.2e-07 60.5 95 38.9
SGA_v2.0_scaffold119G32802 Striga asiatica HOM05D004603 ORTHO05D005244 1.2e-07 60.5 94 35.1
AL1G49060 Arabidopsis lyrata HOM05D004603 ORTHO05D005244 1.5e-07 60.1 103 40.8
ClCG05G020790 Citrullus lanatus HOM05D004603 ORTHO05D005244 1.5e-07 60.1 100 32.0
Lj3g0020788 Lotus japonicus HOM05D004603 ORTHO05D005244 2.0e-07 59.7 94 39.4
Lalb_Chr19g0138841 Lupinus albus HOM05D004603 ORTHO05D005244 2.0e-07 59.7 91 38.5
Psat7g182960 Pisum sativum HOM05D004603 ORTHO05D005244 2.6e-07 59.3 94 35.1
Prupe.2G029400 Prunus persica HOM05D004603 ORTHO05D005244 2.6e-07 59.3 98 36.7
CARHR033890 Cardamine hirsuta HOM05D004603 ORTHO05D005244 3.4e-07 58.9 99 41.4
AUR62026828 Chenopodium quinoa HOM05D004603 ORTHO05D005244 3.4e-07 58.9 98 36.7
Lj1C1244T2 Lonicera japonica HOM05D004603 ORTHO05D005244 3.4e-07 58.9 82 37.8
TWI63G1183 Tripterygium wilfordii HOM05D004603 ORTHO05D005244 3.4e-07 58.9 88 39.8
C06p11480 Brassica napus HOM05D004603 ORTHO05D005244 4.4e-07 58.5 97 37.1
BcaC08g43772 Brassica carinata HOM05D004603 ORTHO05D005244 5.8e-07 58.2 97 37.1
BolC6t36282H Brassica oleracea HOM05D000499 ORTHO05D002825 7.5e-07 57.8 94 38.3
Atru.chr11.786 Acer truncatum HOM05D004603 ORTHO05D005244 9.8e-07 57.4 98 37.8
Carub.0001s3260 Capsella rubella HOM05D004603 ORTHO05D005244 9.8e-07 57.4 98 38.8
QL02p069618 Quercus lobata HOM05D004603 ORTHO05D005244 9.8e-07 57.4 94 38.3
SalBow1G4372 Salvia bowleyana HOM05D004603 ORTHO05D005244 9.8e-07 57.4 90 31.1
arahy.Tifrunner.gnm1.ann1.S7XKIQ Arachis hypogaea HOM05D004603 ORTHO05D005244 1.3e-06 57.0 90 33.3
AT1G34570 Arabidopsis thaliana HOM05D004603 ORTHO05D005244 1.7e-06 56.6 101 38.6
Nitab4.5_0013777g0030 Nicotiana tabacum HOM05D004603 ORTHO05D005244 1.7e-06 56.6 90 40.0
arahy.Tifrunner.gnm1.ann1.30UV9I Arachis hypogaea HOM05D004603 ORTHO05D005244 2.2e-06 56.2 90 33.3
Carub.0007s3712 Capsella rubella HOM05D004603 ORTHO05D005244 2.9e-06 55.8 93 39.8
SalBow5G1267 Salvia bowleyana HOM05D004603 ORTHO05D005244 2.9e-06 55.8 93 32.3
arahy.Tifrunner.gnm1.ann1.FEA8VP Arachis hypogaea HOM05D004603 ORTHO05D005244 3.7e-06 55.5 90 32.2
SalBow5G1211 Salvia bowleyana HOM05D004603 ORTHO05D005244 3.7e-06 55.5 93 32.3
Sp7g17090 Schrenkiella parvula HOM05D004603 ORTHO05D005244 3.7e-06 55.5 96 38.5
MD00G1188600 Malus domestica HOM05D004603 ORTHO05D005244 4.9e-06 55.1 99 33.3
Peaxi162Scf00047g02136 Petunia axillaris HOM05D004603 ORTHO05D005244 4.9e-06 55.1 90 38.9
Aa31LG6G8480 Aethionema arabicum HOM05D004603 ORTHO05D005244 6.4e-06 54.7 95 40.0
Nitab4.5_0000316g0040 Nicotiana tabacum HOM05D004603 ORTHO05D005244 6.4e-06 54.7 90 40.0
Sed0015753 Sechium edule HOM05D004603 ORTHO05D005244 6.4e-06 54.7 100 33.0
TPR.G30506 Trifolium pratense HOM05D004603 ORTHO05D005244 6.4e-06 54.7 94 36.2


User provided reference genes

Program Settings