Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 4.3e-130 468.0 235 100.0
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 9.6e-98 360.5 242 77.7
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 7.6e-79 297.7 242 64.0
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 1.3e-78 297.0 206 72.3
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 1.1e-77 293.9 213 70.4
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 5.5e-77 291.6 243 66.3
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 9.3e-77 290.8 239 64.0
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 1.2e-76 290.4 232 65.1
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 1.6e-76 290.0 260 61.5
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.7e-76 289.3 243 65.4
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 7.9e-76 287.7 243 63.4
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 1.3e-75 287.0 237 62.9
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 1.8e-75 286.6 232 64.2
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 2.3e-75 286.2 239 62.8
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-75 285.4 239 64.4
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 5.1e-75 285.0 239 61.9
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 6.7e-75 284.6 231 64.5
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 8.7e-75 284.3 243 64.2
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 1.1e-74 283.9 203 70.9
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 1.5e-74 283.5 240 63.3
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.5e-74 283.5 240 62.9
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.5e-74 283.5 240 62.9
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 3.3e-74 282.3 244 64.8
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 5.7e-74 281.6 231 63.2
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 9.6e-74 280.8 241 61.0
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 1.3e-73 280.4 242 62.8
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.6e-73 280.0 235 60.9
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 2.1e-73 279.6 244 62.7
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 2.1e-73 279.6 244 63.9
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 3.7e-73 278.9 237 61.6
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 8.2e-73 277.7 253 59.7
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 1.1e-72 277.3 240 60.4
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 1.4e-72 276.9 260 58.8
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 5.3e-72 275.0 244 62.3
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 5.3e-72 275.0 237 61.2
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 5.3e-72 275.0 237 61.2
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 9.0e-72 274.2 240 62.1
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 9.0e-72 274.2 239 61.1
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 9.0e-72 274.2 240 60.8
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 2.0e-71 273.1 209 64.6
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 2.0e-71 273.1 198 68.2
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 2.6e-71 272.7 242 61.6
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 4.5e-71 271.9 201 67.2
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.0e-70 270.8 225 61.8
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 1.7e-70 270.0 201 65.7
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 2.2e-70 269.6 241 60.6
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 2.2e-70 269.6 244 60.7
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 2.2e-70 269.6 238 61.8
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 2.2e-70 269.6 248 62.5
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 2.9e-70 269.2 201 65.7
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 8.4e-70 267.7 233 62.7
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 1.1e-69 267.3 209 66.0
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 1.1e-69 267.3 238 61.3
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 1.1e-69 267.3 310 51.6
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 1.1e-69 267.3 244 60.7
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 1.4e-69 266.9 202 66.3
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 3.2e-69 265.8 200 67.5
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 3.2e-69 265.8 242 61.2
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 4.2e-69 265.4 243 60.5
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.6e-68 263.5 239 60.3
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 2.7e-68 262.7 240 60.4
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 3.5e-68 262.3 201 66.7
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 4.6e-68 261.9 212 65.1
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 4.6e-68 261.9 235 60.4
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 4.6e-68 261.9 235 60.4
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 4.6e-68 261.9 188 75.0
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 7.9e-68 261.2 239 59.4
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 7.9e-68 261.2 229 61.1
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.3e-67 260.4 239 59.8
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.8e-67 260.0 242 59.1
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.3e-67 259.6 237 59.1
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 2.3e-67 259.6 200 64.0
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 3.0e-67 259.2 201 66.2
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 3.9e-67 258.8 239 59.4
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 1.9e-66 256.5 251 57.8
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 4.3e-66 255.4 273 53.8
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 4.8e-65 251.9 225 60.9
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 4.8e-65 251.9 247 57.1
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 1.2e-63 247.3 240 58.3
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 2.6e-63 246.1 218 57.8
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 2.6e-63 246.1 218 57.8
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 7.7e-63 244.6 244 56.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 1.1e-61 240.7 174 68.4
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 3.2e-61 239.2 259 55.2
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 4.2e-61 238.8 165 69.7
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 1.8e-59 233.4 184 65.2
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 5.1e-59 231.9 159 74.2
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 5.1e-59 231.9 160 72.5
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 9.7e-58 227.6 199 61.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.3e-57 227.3 159 72.3
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 6.3e-57 224.9 180 66.1
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 1.2e-55 220.7 175 65.7
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 2.9e-54 216.1 134 76.9
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 6.1e-52 208.4 243 53.5
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 7.9e-52 208.0 194 59.3
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.0e-35 154.5 125 60.0
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 7.5e-34 148.3 113 65.5
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.2e-30 136.7 132 56.1
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.3e-25 120.9 122 54.1
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 1.1e-24 117.9 105 63.8
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 2.4e-24 116.7 113 57.5
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 4.7e-20 102.4 70 71.4
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 8.9e-19 98.2 92 55.4
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 8.3e-17 91.7 78 57.7
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 9.2e-16 88.2 61 72.1
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 2.6e-10 70.1 81 53.1
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 4.1e-08 62.8 73 50.7


User provided reference genes

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