Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.5e-305 1052.0 523 100.0
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 6.4e-243 844.0 522 80.8
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 2.9e-235 818.5 523 76.7
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 1.6e-225 786.2 521 78.1
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 3.5e-225 785.0 523 74.2
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 7.8e-225 783.9 522 73.9
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.7e-224 782.7 518 74.3
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 5.1e-224 781.2 518 74.9
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 5.6e-223 777.7 515 74.2
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 9.5e-223 776.9 523 73.4
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 4.7e-222 774.6 523 73.0
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 4.7e-222 774.6 523 72.3
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.7e-219 766.1 523 73.4
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 1.1e-218 763.5 523 72.5
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.4e-218 763.1 523 72.3
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.9e-218 762.7 523 72.7
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.9e-218 762.7 529 72.6
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 1.9e-218 762.7 524 73.9
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.6e-217 759.6 520 72.7
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 2.7e-217 758.8 519 71.9
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 1.3e-216 756.5 523 72.7
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 3.0e-216 755.4 523 71.3
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 5.1e-216 754.6 477 77.1
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 1.1e-215 753.4 523 72.1
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 1.5e-215 753.1 519 71.7
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 1.5e-215 753.1 522 72.2
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.9e-215 752.7 524 70.8
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 4.3e-215 751.5 523 71.7
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 4.3e-215 751.5 523 72.1
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 7.3e-215 750.7 519 71.5
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 9.6e-215 750.4 525 71.8
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.2e-214 750.0 519 71.5
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.2e-214 750.0 523 70.2
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 2.1e-214 749.2 523 72.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 3.6e-214 748.4 523 70.9
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 6.2e-214 747.7 523 70.2
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 6.2e-214 747.7 519 71.3
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 6.2e-214 747.7 536 69.6
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 1.1e-213 746.9 536 69.8
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 2.4e-213 745.7 523 72.5
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.4e-213 745.7 524 71.0
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 5.2e-213 744.6 523 71.7
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.2e-212 743.4 523 71.1
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 1.5e-212 743.0 523 70.9
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 4.4e-212 741.5 525 70.9
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 5.8e-212 741.1 522 70.1
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 2.9e-211 738.8 523 71.3
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 1.9e-210 736.1 492 73.6
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 1.9e-210 736.1 523 68.6
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 2.4e-210 735.7 523 68.6
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.4e-210 735.7 520 70.0
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 5.4e-210 734.6 523 70.4
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 1.6e-209 733.0 523 70.0
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 1.6e-209 733.0 492 73.4
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 4.6e-209 731.5 523 70.7
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 6.0e-209 731.1 523 70.7
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 7.8e-209 730.7 522 69.7
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 7.8e-209 730.7 523 69.6
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.0e-208 730.3 523 70.0
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 2.3e-208 729.2 523 70.0
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 3.9e-208 728.4 523 70.0
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 5.1e-208 728.0 523 70.0
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 5.1e-208 728.0 523 69.4
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 8.7e-208 727.2 526 70.2
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 8.7e-208 727.2 471 73.9
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.5e-207 726.5 524 68.5
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 5.6e-207 724.5 523 69.2
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.6e-206 723.0 519 69.7
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 2.1e-206 722.6 523 69.2
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 3.6e-206 721.8 523 69.2
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 3.6e-206 721.8 489 71.6
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 3.6e-206 721.8 525 67.8
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 3.6e-206 721.8 522 68.0
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.4e-205 719.9 523 67.3
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 4.0e-205 718.4 524 68.5
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 4.5e-204 714.9 523 66.7
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.2e-203 712.6 523 68.5
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 2.9e-203 712.2 523 68.3
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 3.8e-203 711.8 524 68.3
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 6.4e-203 711.1 524 68.3
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.1e-202 710.3 484 74.4
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 2.4e-202 709.1 524 67.4
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.4e-202 709.1 603 62.2
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 9.3e-202 707.2 489 71.8
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 1.2e-201 706.8 525 68.0
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 6.0e-201 704.5 462 73.2
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 1.8e-200 703.0 527 67.0
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 3.0e-200 702.2 523 67.5
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 1.9e-199 699.5 519 66.9
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 5.3e-197 691.4 527 66.0
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 5.3e-197 691.4 524 66.2
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 9.0e-197 690.6 560 63.4
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 2.0e-196 689.5 520 67.1
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 5.8e-196 688.0 523 66.7
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 9.9e-196 687.2 524 67.0
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 1.3e-195 686.8 524 65.5
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 1.7e-195 686.4 520 66.7
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.7e-195 686.4 524 67.0
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.7e-195 686.4 523 65.6
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 2.9e-195 685.6 520 66.5
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.1e-194 683.7 523 66.9
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 1.1e-194 683.7 523 66.5
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.9e-194 682.9 519 64.0
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.9e-194 682.9 519 64.0
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 4.2e-194 681.8 487 69.8
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 5.5e-194 681.4 522 64.4
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.1e-193 679.5 522 65.1
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 1.0e-192 677.2 487 69.6
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 6.7e-192 674.5 524 64.3
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 3.3e-191 672.2 497 67.6
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 7.4e-191 671.0 486 70.4
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 9.6e-191 670.6 523 65.8
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 3.7e-190 668.7 408 79.2
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 6.2e-190 667.9 522 64.8
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 1.4e-189 666.8 523 64.8
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 2.7e-185 652.5 534 63.3
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 2.8e-182 642.5 523 64.8
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.1e-181 640.6 488 66.4
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 5.3e-181 638.3 503 66.0
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.5e-175 620.2 404 73.5
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 2.4e-173 612.8 486 65.2
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.5e-172 610.1 537 59.4
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 1.1e-170 604.0 529 58.2
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 8.5e-163 577.8 525 55.0
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.8e-152 543.5 531 55.2
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 1.5e-151 540.4 532 55.3
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 1.7e-147 526.9 533 52.7
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.7e-145 519.6 523 55.1
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 1.3e-142 510.8 499 54.5
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 1.8e-141 506.9 396 65.7
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.8e-136 490.3 335 73.4
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 7.5e-135 485.0 554 48.9
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 8.3e-134 481.5 428 59.8
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.3e-131 474.2 365 66.6
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 1.2e-129 467.6 538 48.1
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.1e-125 454.5 468 53.2
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 1.2e-124 451.1 530 48.7
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 2.0e-124 450.3 383 62.1
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.1e-114 417.9 388 60.3
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 9.6e-98 361.7 308 56.5
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 2.8e-97 360.1 579 40.2
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 7.6e-95 352.1 502 41.4
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 7.6e-79 298.9 408 46.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 2.2e-62 244.2 230 58.3
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 9.4e-61 238.8 166 72.9
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 4.3e-58 229.9 461 31.9
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.1e-52 211.1 225 52.9
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 2.8e-49 200.7 417 33.3
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 5.9e-47 193.0 367 36.5
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 2.5e-45 187.6 91 94.5
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 2.1e-44 184.5 109 84.4
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 3.9e-43 180.3 467 30.8
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 4.4e-42 176.8 97 80.4
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.6e-39 167.5 118 68.6
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 3.5e-39 167.2 409 30.8
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 2.3e-35 154.5 170 48.2
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 1.5e-34 151.8 157 55.4
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 1.3e-22 112.1 120 55.8
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 3.8e-22 110.5 80 60.0
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 5.0e-22 110.2 131 53.4
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.9e-17 93.6 158 39.2
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 3.9e-14 84.0 40 92.5
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 4.3e-13 80.5 40 85.0
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 4.7e-12 77.0 48 72.9
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 2.9e-09 67.8 32 90.6
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 3.7e-09 67.4 33 84.8
HPP92_017571 Vanilla planifolia HOM05D005323 ORTHO05D006820 3.5e-07 60.8 291 23.7
HPP92_028318 Vanilla planifolia HOM05D005323 ORTHO05D006820 1.7e-06 58.5 189 26.5
Cc03_g10690 Coffea canephora HOM05D002943 ORTHO05D002685 2.3e-06 58.2 74 37.8
GSVIVG01001162001 Vitis vinifera HOM05D002943 ORTHO05D002685 3.0e-06 57.8 74 36.5
Nitab4.5_0002913g0040 Nicotiana tabacum HOM05D005323 ORTHO05D006820 5.0e-06 57.0 188 27.1
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 5.0e-06 57.0 189 26.5


User provided reference genes

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