Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 3.2e-122 441.8 228 100.0
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 4.8e-62 241.9 246 57.7
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 5.2e-48 195.3 244 53.7
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 2.7e-41 172.9 241 43.2
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 3.7e-38 162.5 237 44.3
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 2.4e-37 159.8 249 42.2
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.1e-37 159.1 246 42.3
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 5.4e-37 158.7 236 42.4
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 7.0e-37 158.3 196 48.0
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.5e-36 156.0 235 43.8
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 1.0e-35 154.5 232 43.5
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 1.3e-35 154.1 232 43.5
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 2.5e-34 149.8 237 41.4
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.5e-34 149.8 195 46.2
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 3.3e-34 149.4 193 46.1
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 5.5e-34 148.7 192 45.8
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 6.1e-33 145.2 222 41.4
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.0e-32 144.4 194 45.9
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.0e-32 144.4 193 44.0
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 1.4e-32 144.1 202 43.6
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 1.4e-32 144.1 210 42.9
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 2.3e-32 143.3 237 42.2
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.2e-31 141.0 214 40.7
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 2.0e-31 140.2 193 42.0
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 3.4e-31 139.4 195 42.6
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 5.7e-31 138.7 198 42.9
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 5.7e-31 138.7 200 44.0
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 7.5e-31 138.3 212 43.4
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.3e-30 137.5 193 42.0
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.2e-30 136.7 228 41.7
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 2.2e-30 136.7 243 39.1
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 8.3e-30 134.8 241 39.4
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.1e-29 134.4 220 40.0
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.1e-29 134.4 199 45.7
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 1.1e-29 134.4 193 40.4
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 1.1e-29 134.4 192 45.8
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.4e-29 134.0 199 46.2
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.4e-29 134.0 192 46.4
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.8e-29 133.7 193 46.1
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 2.4e-29 133.3 241 40.2
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 3.2e-29 132.9 216 40.7
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.2e-29 132.9 198 42.4
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 3.2e-29 132.9 206 40.8
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.4e-29 132.1 195 44.6
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.4e-29 132.1 195 44.6
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.2e-28 131.0 228 40.4
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.6e-28 130.6 228 40.4
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 1.6e-28 130.6 202 41.6
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 2.0e-28 130.2 200 43.5
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 7.8e-28 128.3 202 41.1
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.7e-27 127.1 230 37.8
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 8.6e-27 124.8 211 36.5
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.9e-26 123.6 199 42.2
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 3.3e-26 122.9 227 38.8
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 4.3e-26 122.5 234 39.7
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 4.3e-26 122.5 197 41.1
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 7.3e-26 121.7 201 42.3
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 2.1e-25 120.2 196 41.3
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 2.1e-25 120.2 198 40.9
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 2.8e-25 119.8 187 39.0
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 3.6e-25 119.4 190 42.6
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.4e-24 117.5 197 38.6
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 2.3e-24 116.7 221 38.0
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 5.2e-24 115.5 189 38.6
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 6.8e-24 115.2 195 41.0
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 3.4e-23 112.8 192 40.1
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 4.4e-23 112.5 250 33.2
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 4.1e-21 105.9 240 33.8
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 7.0e-21 105.1 258 31.4
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.7e-20 103.2 154 37.7
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.6e-20 102.4 222 37.8
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 6.0e-20 102.1 177 37.3
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 7.3e-18 95.1 168 39.3
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 2.1e-17 93.6 201 35.3
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 8.1e-17 91.7 211 31.3
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.4e-16 90.9 198 33.3
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 2.3e-16 90.1 227 33.0
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 2.3e-16 90.1 201 34.8
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 6.8e-16 88.6 204 36.8
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 2.0e-15 87.0 143 40.6
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 2.9e-14 83.2 193 33.7
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.9e-14 82.4 222 35.1
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.9e-13 80.5 141 33.3
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 7.1e-13 78.6 192 31.2
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.2e-12 77.8 150 34.0
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 2.1e-12 77.0 195 32.8
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.3e-11 73.6 132 36.4
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 2.3e-11 73.6 182 33.0
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 3.0e-11 73.2 153 31.4
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 5.1e-11 72.4 198 31.3
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 6.6e-11 72.0 212 29.2
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 2.5e-10 70.1 174 32.2
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 9.5e-10 68.2 126 37.3
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 9.5e-10 68.2 217 29.5
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 1.2e-09 67.8 132 37.1
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.1e-09 67.0 130 33.8
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 4.7e-09 65.9 254 28.7
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 6.2e-09 65.5 234 27.8
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 6.2e-09 65.5 141 30.5
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 1.8e-08 63.9 206 30.1
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 2.3e-08 63.5 107 43.9
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 6.8e-08 62.0 132 37.9
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.5e-07 60.8 140 32.9
TPR.G34860 Trifolium pratense HOM05D007287 ORTHO05D008965 3.4e-07 59.7 69 47.8
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 5.8e-07 58.9 139 33.1
Sp4g11120 Schrenkiella parvula HOM05D009615 ORTHO05D011760 4.9e-06 55.8 80 42.5
Psat7g166880 Pisum sativum HOM05D007287 ORTHO05D008965 8.4e-06 55.1 114 34.2


User provided reference genes

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