Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 5.6e-153 544.3 283 100.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 3.4e-126 455.3 276 85.1
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 6.1e-123 444.5 273 82.8
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.4e-111 406.0 281 72.6
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.6e-110 403.3 279 72.4
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 5.0e-109 398.3 271 73.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 9.4e-108 394.0 278 70.9
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.1e-107 392.9 269 71.4
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 8.0e-107 391.0 263 73.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.2e-105 387.1 278 70.5
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.4e-105 385.2 278 70.1
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 9.7e-105 384.0 274 68.6
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 9.7e-105 384.0 279 68.5
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.7e-104 383.3 271 69.4
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.7e-104 382.1 272 71.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.8e-104 381.7 275 69.8
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 8.2e-104 380.9 272 71.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.1e-103 380.6 270 71.9
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.8e-103 379.8 279 69.9
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.1e-103 379.0 276 69.2
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 4.1e-103 378.6 271 70.5
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 7.0e-103 377.9 273 68.9
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.0e-103 377.9 271 70.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 7.0e-103 377.9 266 70.3
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 9.1e-103 377.5 274 68.6
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.2e-102 377.1 267 68.5
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.6e-102 376.7 278 67.6
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.5e-102 375.6 280 67.9
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.5e-102 375.6 279 66.7
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 5.9e-102 374.8 270 70.4
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.7e-101 373.2 273 67.8
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-101 373.2 272 68.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.9e-101 372.5 273 68.5
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.9e-101 372.5 272 68.8
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 3.8e-101 372.1 277 67.1
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-100 370.5 272 68.4
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.9e-100 369.8 269 65.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 7.2e-100 367.9 280 66.8
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 9.4e-100 367.5 273 66.7
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 9.4e-100 367.5 278 65.8
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 9.4e-100 367.5 272 67.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.6e-99 366.7 279 67.0
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.7e-99 365.2 274 66.8
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 6.1e-99 364.8 278 65.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 8.0e-99 364.4 265 66.8
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.0e-99 364.4 272 67.3
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.4e-98 363.6 265 67.5
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.4e-98 363.6 274 67.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.8e-98 363.2 270 68.5
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.0e-98 362.5 269 66.9
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.2e-98 361.7 270 68.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 8.8e-98 360.9 265 66.4
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 8.8e-98 360.9 265 66.4
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.5e-97 360.1 274 65.7
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.5e-97 360.1 278 65.5
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.6e-97 359.4 266 69.5
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.6e-97 359.4 265 66.4
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 3.4e-97 359.0 326 59.2
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 4.4e-97 358.6 274 65.3
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 7.5e-97 357.8 270 67.4
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.3e-96 357.1 264 66.3
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.8e-96 355.9 270 67.0
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.7e-96 355.5 274 67.9
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.4e-95 353.6 283 63.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 3.1e-95 352.4 270 66.7
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 7.0e-95 351.3 278 64.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 9.1e-95 350.9 283 62.9
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 9.1e-95 350.9 282 64.5
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 7.7e-94 347.8 273 66.3
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.3e-93 347.1 281 63.3
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.3e-93 347.1 273 63.7
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 2.3e-93 346.3 274 65.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 5.0e-93 345.1 236 75.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 6.5e-93 344.7 273 62.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 8.6e-93 344.4 264 65.5
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.5e-92 343.6 245 71.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.9e-92 343.2 268 65.3
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 4.2e-92 342.0 275 61.5
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.6e-91 340.1 279 61.6
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 8.0e-91 337.8 277 63.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.4e-90 337.0 278 61.9
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.4e-90 337.0 279 63.8
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 5.2e-90 335.1 268 63.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.2e-89 334.0 280 61.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.3e-88 330.5 263 64.6
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.9e-88 328.6 294 59.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.2e-86 323.9 271 60.9
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.7e-86 322.8 264 62.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 7.8e-86 321.2 231 68.8
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.7e-85 320.1 241 68.9
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 5.0e-85 318.5 276 60.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.3e-84 315.5 280 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 3.6e-83 312.4 254 63.0
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.2e-82 308.5 239 68.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.2e-81 307.4 222 70.3
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 2.6e-81 306.2 263 58.9
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.9e-80 302.8 234 64.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.2e-79 299.3 221 71.0
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 7.0e-79 298.1 389 44.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 4.6e-78 295.4 261 60.2
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.9e-74 281.2 279 53.4
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.3e-66 256.5 240 57.5
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.2e-65 254.2 268 51.9
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.4e-63 247.3 258 52.3
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.2e-54 217.6 149 72.5
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 2.3e-53 213.4 196 60.2
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 6.9e-50 201.8 220 52.7
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.1e-46 190.3 178 60.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-44 183.3 150 58.7
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 8.1e-43 178.3 152 59.2
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 5.3e-42 175.6 215 47.4
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.9e-40 169.9 132 65.9
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.1e-39 165.2 119 70.6
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 2.3e-37 160.2 120 72.5
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.0e-37 159.8 146 50.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.9e-32 143.3 148 55.4
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 8.7e-29 131.7 128 59.4
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 3.1e-26 123.2 209 40.7
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.6e-22 109.4 221 35.3
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.9e-21 106.3 77 70.1
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.8e-19 100.1 79 67.1
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.1e-10 71.6 108 43.5
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 2.9e-08 63.5 46 63.0


User provided reference genes

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