Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0329 Erigeron canadensis HOM05D007690 ORTHO05D009685 7.3e-138 493.8 238 100.0
ECA248G1370 Erigeron canadensis HOM05D007690 ORTHO05D009685 2.0e-58 229.9 132 82.6
HanXRQChr01g0008191 Helianthus annuus HOM05D007690 ORTHO05D009685 1.6e-55 220.3 132 78.8
Lsat_1_v5_gn_5_157261 Lactuca sativa HOM05D007690 ORTHO05D009685 2.0e-55 219.9 131 77.9
Lj1C1090T5 Lonicera japonica HOM05D007690 ORTHO05D009685 1.9e-53 213.4 134 73.1
ClCG04G005610 Citrullus lanatus HOM05D007690 ORTHO05D009685 3.3e-53 212.6 132 75.0
EL10Ac3g07245 Beta vulgaris HOM05D007690 ORTHO05D009685 5.6e-53 211.8 134 72.4
CsaV3_4G029540 Cucumis sativus L. HOM05D007690 ORTHO05D009685 1.2e-52 210.7 132 74.2
Sed0012923 Sechium edule HOM05D007690 ORTHO05D009685 1.2e-52 210.7 132 73.5
COL.COLO4_21470 Corchorus olitorius HOM05D007690 ORTHO05D009685 1.6e-52 210.3 132 73.5
AUR62030309 Chenopodium quinoa HOM05D007690 ORTHO05D009685 2.1e-52 209.9 134 71.6
MSTRG.6368 Avicennia marina HOM05D007690 ORTHO05D009685 2.8e-52 209.5 132 73.5
Hund19090 Selenicereus undatus HOM05D007690 ORTHO05D009685 3.6e-52 209.1 132 72.7
Manes.08G060600 Manihot esculenta HOM05D007690 ORTHO05D009685 4.7e-52 208.8 131 73.3
Rhsim03G0038800 Rhododendron simsii HOM05D007690 ORTHO05D009685 4.7e-52 208.8 132 72.7
RcHm_v2.0_Chr2g0125791 Rosa chinensis HOM05D007690 ORTHO05D009685 4.7e-52 208.8 132 72.7
CiPaw.10G040400 Carya illinoinensis HOM05D007690 ORTHO05D009685 6.2e-52 208.4 132 73.5
Potri.006G039500 Populus trichocarpa HOM05D007690 ORTHO05D009685 6.2e-52 208.4 132 72.7
QL07p011032 Quercus lobata HOM05D007690 ORTHO05D009685 6.2e-52 208.4 132 73.5
vmacro07787 Vaccinium macrocarpon HOM05D007690 ORTHO05D009685 6.2e-52 208.4 132 72.7
Cfa020001 Carpinus fangiana HOM05D007690 ORTHO05D009685 8.0e-52 208.0 132 73.5
Duzib093G0724 Durio zibethinus HOM05D007690 ORTHO05D009685 8.0e-52 208.0 132 72.0
Oeu059361.1 Olea europaea HOM05D007690 ORTHO05D009685 8.0e-52 208.0 132 72.7
SabraUnG0002200 Salix brachista HOM05D007690 ORTHO05D009685 8.0e-52 208.0 132 72.7
TWI53G1776 Tripterygium wilfordii HOM05D007690 ORTHO05D009685 1.4e-51 207.2 132 73.5
Haze_20233 Corylus avellana HOM05D007690 ORTHO05D009685 1.8e-51 206.8 132 72.7
Sopen03g024910 Solanum pennellii HOM05D007690 ORTHO05D009685 1.8e-51 206.8 138 69.6
CSS0001684 Camellia sinensis var. sinensis HOM05D007690 ORTHO05D009685 2.3e-51 206.5 132 72.0
Dinv06191 Davidia involucrata HOM05D007690 ORTHO05D009685 2.3e-51 206.5 132 72.7
Atru.chr1.1432 Acer truncatum HOM05D007690 ORTHO05D009685 4.0e-51 205.7 131 74.0
Gohir.D13G001600 Gossypium hirsutum HOM05D007690 ORTHO05D009685 4.0e-51 205.7 132 72.0
Gorai.013G001500 Gossypium raimondii HOM05D007690 ORTHO05D009685 4.0e-51 205.7 132 72.0
MELO3C019091.2 Cucumis melo HOM05D007690 ORTHO05D009685 8.9e-51 204.5 153 64.7
Peaxi162Scf00076g00414 Petunia axillaris HOM05D007690 ORTHO05D009685 8.9e-51 204.5 132 70.5
Sabra06G0026600 Salix brachista HOM05D007690 ORTHO05D009685 8.9e-51 204.5 132 71.2
AUR62018353 Chenopodium quinoa HOM05D007690 ORTHO05D009685 1.2e-50 204.1 134 70.9
CANSAT64G2689 Cannabis sativa HOM05D007690 ORTHO05D009685 1.5e-50 203.8 130 72.3
Migut.J01648 Erythranthe guttata HOM05D007690 ORTHO05D009685 2.6e-50 203.0 132 68.9
Nn8g41087 Nelumbo nucifera HOM05D007690 ORTHO05D009685 2.6e-50 203.0 134 69.4
Solyc03g094020.3 Solanum lycopersicum HOM05D007690 ORTHO05D009685 2.6e-50 203.0 138 67.4
Actinidia01830 Actinidia chinensis HOM05D007690 ORTHO05D009685 3.4e-50 202.6 132 70.5
Ah.13g076840 Amaranthus hybridus HOM05D007690 ORTHO05D009685 3.4e-50 202.6 134 68.7
Ciclev10004303m.g Citrus clementina HOM05D007690 ORTHO05D009685 3.4e-50 202.6 134 69.4
Thecc.05G129100 Theobroma cacao HOM05D007690 ORTHO05D009685 3.4e-50 202.6 131 71.0
Nitab4.5_0000470g0050 Nicotiana tabacum HOM05D007690 ORTHO05D009685 4.4e-50 202.2 132 68.9
Nitab4.5_0005001g0030 Nicotiana tabacum HOM05D007690 ORTHO05D009685 4.4e-50 202.2 132 68.9
GSVIVG01033641001 Vitis vinifera HOM05D007690 ORTHO05D009685 5.8e-50 201.8 132 70.5
FvH4_6g25360 Fragaria vesca HOM05D007690 ORTHO05D009685 1.7e-49 200.3 132 70.5
FAN02G0812 Fragaria x ananassa HOM05D007690 ORTHO05D009685 1.7e-49 200.3 132 70.5
Actinidia17955 Actinidia chinensis HOM05D007690 ORTHO05D009685 6.4e-49 198.4 132 70.5
Cpa.g.sc5.162 Carica papaya HOM05D007690 ORTHO05D009685 6.4e-49 198.4 132 68.2
Gohir.A13G002200 Gossypium hirsutum HOM05D007690 ORTHO05D009685 1.1e-48 197.6 130 71.5
MD14G1090500 Malus domestica HOM05D007690 ORTHO05D009685 4.1e-48 195.7 130 68.5
Glyma.03G127200 Glycine max HOM05D007690 ORTHO05D009685 5.4e-48 195.3 132 68.2
Eucgr.A02235 Eucalyptus grandis HOM05D007690 ORTHO05D009685 9.2e-48 194.5 134 67.2
Nn7g36803 Nelumbo nucifera HOM05D007690 ORTHO05D009685 9.2e-48 194.5 132 70.5
Lalb_Chr14g0365781 Lupinus albus HOM05D007690 ORTHO05D009685 1.2e-47 194.1 131 67.9
MBI13_g09226_MAGBIO Magnolia biondii HOM05D007690 ORTHO05D009685 1.2e-47 194.1 158 60.8
PGSC0003DMG400008345 Solanum tuberosum HOM05D007690 ORTHO05D009685 1.2e-47 194.1 132 68.9
VMungo1383G0528 Vigna mungo HOM05D007690 ORTHO05D009685 1.6e-47 193.7 131 68.7
CAN.G297.10 Capsicum annuum HOM05D007690 ORTHO05D009685 2.7e-47 193.0 132 66.7
Phvul.001G123000 Phaseolus vulgaris HOM05D007690 ORTHO05D009685 2.7e-47 193.0 131 68.7
Medtr7g089780 Medicago truncatula HOM05D007690 ORTHO05D009685 1.7e-46 190.3 131 67.2
Lalb_Chr22g0357471 Lupinus albus HOM05D007690 ORTHO05D009685 2.3e-46 189.9 131 66.4
CDE04G2124 Ceratophyllum demersum HOM05D007690 ORTHO05D009685 3.0e-46 189.5 131 66.4
Lj1g0005796 Lotus japonicus HOM05D007690 ORTHO05D009685 5.1e-46 188.7 133 66.9
HPP92_001694 Vanilla planifolia HOM05D007690 ORTHO05D009685 5.1e-46 188.7 137 67.2
DCAR_020576 Daucus carota HOM05D007690 ORTHO05D009685 6.6e-46 188.3 132 65.2
ATR1096G016 Amborella trichopoda HOM05D007690 ORTHO05D009685 5.6e-45 185.3 134 63.4
Hma1.2p1_0548F.1_g176720 Hydrangea macrophylla HOM05D007690 ORTHO05D009685 9.5e-45 184.5 132 67.4
SalBow6G4309 Salvia bowleyana HOM05D007690 ORTHO05D009685 1.2e-44 184.1 132 65.9
Psat3g079120 Pisum sativum HOM05D007690 ORTHO05D009685 3.6e-44 182.6 132 64.4
PGR031G0865 Punica granatum HOM05D007690 ORTHO05D009685 4.7e-44 182.2 134 65.7
Sc15g0003650 Simmondsia chinensis HOM05D007690 ORTHO05D009685 4.7e-44 182.2 135 65.2
Ca_08388_v3 Cicer arietinum L. HOM05D007690 ORTHO05D009685 1.4e-43 180.6 134 64.2
Cc06_g19420 Coffea canephora HOM05D007690 ORTHO05D009685 5.2e-43 178.7 132 61.4
SGA_v2.0_scaffold105G30282 Striga asiatica HOM05D007690 ORTHO05D009685 2.0e-42 176.8 132 63.6
SGA_v2.0_scaffold66G22254 Striga asiatica HOM05D007690 ORTHO05D009685 2.0e-42 176.8 132 63.6
Prupe.7G033900 Prunus persica HOM05D007690 ORTHO05D009685 3.7e-41 172.6 116 69.0
arahy.Tifrunner.gnm1.ann1.AJ9HGA Arachis hypogaea HOM05D007690 ORTHO05D009685 3.2e-40 169.5 132 61.4
unitig_37.g12785 Utricularia gibba HOM05D007690 ORTHO05D009685 3.2e-40 169.5 131 63.4
arahy.Tifrunner.gnm1.ann1.L6USB4 Arachis hypogaea HOM05D007690 ORTHO05D009685 4.1e-40 169.1 132 61.4
Mapoly0147s0026 Marchantia polymorpha HOM05D007690 ORTHO05D009685 1.3e-38 164.1 136 56.6
TPR.G34623 Trifolium pratense HOM05D007690 ORTHO05D009685 4.3e-37 159.1 95 73.7
SMO356G0027 Selaginella moellendorffii HOM05D007690 ORTHO05D009685 8.9e-35 151.4 133 54.9
Zm00001eb333050 Zea mays HOM05D007690 ORTHO05D009685 2.6e-34 149.8 135 53.3
Os01g0268600 Oryza sativa ssp. japonica HOM05D007690 ORTHO05D009685 4.9e-33 145.6 141 48.9
Pp3c5_4430 Physcomitrium patens HOM05D007690 ORTHO05D009685 4.9e-33 145.6 153 52.3
CiPaw.09G048300 Carya illinoinensis HOM05D007690 ORTHO05D009685 1.3e-30 137.5 94 68.1
MCO14G519 Micromonas commoda HOM05D007690 ORTHO05D009685 2.7e-15 86.7 125 37.6
CBR_g21789 Chara braunii HOM05D007690 ORTHO05D009685 1.0e-14 84.7 64 57.8


User provided reference genes

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