Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 8.0e-79 297.0 144 100.0
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 9.5e-56 220.3 145 75.2
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 1.3e-49 199.9 146 69.2
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.1e-27 125.2 147 49.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 7.1e-27 124.4 150 43.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.6e-26 121.7 146 46.6
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 1.3e-25 120.2 147 44.9
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 3.0e-25 119.0 116 53.4
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 6.6e-25 117.9 154 41.6
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.9e-24 116.3 150 43.3
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 2.5e-24 115.9 152 45.4
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 5.6e-24 114.8 131 48.9
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 9.6e-24 114.0 148 43.2
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.6e-23 113.2 156 44.2
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.6e-23 113.2 156 43.6
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.1e-23 112.8 150 45.3
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 2.8e-23 112.5 154 46.1
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 3.6e-23 112.1 150 46.0
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.2e-23 111.3 153 42.5
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.8e-22 109.8 113 50.4
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.8e-22 109.8 149 46.3
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 2.4e-22 109.4 151 46.4
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 3.1e-22 109.0 165 43.0
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.0e-22 108.6 156 44.2
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 9.0e-22 107.5 153 43.8
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.5e-21 106.7 152 40.8
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 1.5e-21 106.7 156 46.2
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 3.4e-21 105.5 148 42.6
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 4.4e-21 105.1 145 41.4
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 7.6e-21 104.4 165 40.0
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.3e-20 103.6 154 41.6
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.3e-20 103.6 148 41.2
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 3.8e-20 102.1 148 38.5
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.4e-19 100.1 155 35.5
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.4e-19 100.1 149 40.3
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 4.2e-19 98.6 153 45.1
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 9.3e-19 97.4 148 40.5
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 9.3e-19 97.4 149 38.9
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 9.3e-19 97.4 157 40.1
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 2.1e-18 96.3 156 38.5
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.1e-18 96.3 144 39.6
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.0e-17 94.0 143 40.6
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.3e-17 93.6 153 40.5
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.7e-17 93.2 153 39.9
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.7e-17 93.2 152 39.5
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.7e-17 93.2 147 36.7
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 1.7e-17 93.2 146 42.5
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 3.9e-17 92.0 131 41.2
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 5.1e-17 91.7 153 38.6
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 8.7e-17 90.9 110 43.6
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.1e-16 90.5 153 38.6
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.1e-16 90.5 163 36.8
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.9e-16 89.7 164 36.6
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 9.6e-16 87.4 114 43.0
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.1e-15 86.3 138 38.4
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 4.8e-15 85.1 113 42.5
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 6.2e-15 84.7 152 38.2
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 8.1e-15 84.3 145 40.7
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 2.4e-14 82.8 145 37.2
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 3.1e-14 82.4 155 34.8
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 5.3e-14 81.6 167 35.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 6.9e-14 81.3 156 34.6
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 1.5e-13 80.1 65 58.5
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 2.6e-13 79.3 147 39.5
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.6e-13 79.3 147 39.5
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 2.6e-13 79.3 155 33.5
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 3.4e-13 79.0 129 36.4
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 5.8e-13 78.2 165 33.9
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.8e-13 78.2 119 38.7
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 9.9e-13 77.4 164 34.8
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 1.3e-12 77.0 146 37.7
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.3e-12 77.0 159 32.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.3e-12 77.0 156 32.1
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 1.3e-12 77.0 147 38.8
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 1.3e-12 77.0 147 38.8
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 1.3e-12 77.0 147 38.8
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 1.7e-12 76.6 150 38.0
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 2.2e-12 76.3 147 38.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 6.4e-12 74.7 64 56.2
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 8.4e-12 74.3 156 37.8
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 8.4e-12 74.3 106 42.5
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 1.1e-11 73.9 150 36.7
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.1e-11 73.9 166 34.9
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 1.4e-11 73.6 174 33.9
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 3.2e-11 72.4 134 37.3
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 4.2e-11 72.0 134 37.3
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 4.2e-11 72.0 138 34.8
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.2e-11 72.0 119 33.6
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 5.4e-11 71.6 155 36.8
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 5.4e-11 71.6 116 36.2
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 7.1e-11 71.2 152 36.2
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 7.1e-11 71.2 168 32.7
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 9.3e-11 70.9 86 47.7
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 9.3e-11 70.9 161 34.2
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.1e-10 69.7 129 38.0
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 3.5e-10 68.9 158 32.9
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.9e-09 65.5 116 40.5
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 3.9e-09 65.5 130 33.8
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 7.4e-08 61.2 117 33.3
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 7.4e-08 61.2 117 33.3
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 7.4e-08 61.2 44 61.4
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 6.2e-07 58.2 35 68.6
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 6.2e-07 58.2 36 61.1


User provided reference genes

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