Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 2.4e-34 148.3 74 100.0
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 3.4e-33 144.4 74 95.9
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 4.9e-32 140.6 71 98.6
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 9.6e-28 126.3 72 86.1
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.1e-27 125.2 72 83.3
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 2.1e-27 125.2 71 87.3
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 2.1e-27 125.2 71 85.9
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 2.8e-27 124.8 71 84.5
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 3.6e-27 124.4 65 93.8
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 4.8e-27 124.0 71 84.5
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 4.8e-27 124.0 71 84.5
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 8.1e-27 123.2 71 85.9
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 8.1e-27 123.2 72 83.3
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 3.1e-26 121.3 67 86.6
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.0e-26 120.9 73 80.8
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 4.0e-26 120.9 71 81.7
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 5.3e-26 120.6 71 80.3
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 5.3e-26 120.6 74 79.7
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 9.0e-26 119.8 70 84.3
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 1.2e-25 119.4 72 81.9
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 1.2e-25 119.4 74 79.7
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.2e-25 119.4 71 83.1
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 1.2e-25 119.4 74 78.4
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 1.5e-25 119.0 71 83.1
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 2.0e-25 118.6 73 82.2
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.0e-25 118.6 72 79.2
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.0e-25 118.6 72 79.2
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.0e-25 118.6 72 79.2
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 2.6e-25 118.2 65 87.7
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.6e-25 118.2 65 87.7
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 2.6e-25 118.2 65 87.7
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 3.4e-25 117.9 71 81.7
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 3.4e-25 117.9 71 83.1
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 3.4e-25 117.9 65 89.2
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 3.4e-25 117.9 65 89.2
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 3.4e-25 117.9 68 88.2
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 7.6e-25 116.7 71 81.7
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 7.6e-25 116.7 71 81.7
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.2e-24 115.2 65 84.6
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.2e-24 115.2 73 82.2
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 2.2e-24 115.2 63 88.9
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 3.8e-24 114.4 63 88.9
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 3.8e-24 114.4 63 88.9
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 3.8e-24 114.4 74 77.0
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 4.9e-24 114.0 63 88.9
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 8.4e-24 113.2 71 77.5
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 1.1e-23 112.8 63 87.3
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.4e-23 112.5 72 79.2
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.4e-23 112.5 63 88.9
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 1.4e-23 112.5 66 87.9
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.9e-23 112.1 63 87.3
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.9e-23 112.1 63 87.3
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 5.4e-23 110.5 65 84.6
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.2e-22 109.4 69 78.3
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 3.9e-21 104.4 67 77.6
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 6.6e-21 103.6 58 81.0
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 5.6e-20 100.5 70 70.0
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 9.6e-20 99.8 72 72.2
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 1.3e-19 99.4 74 67.6
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.3e-19 99.4 65 76.9
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 2.1e-19 98.6 58 81.0
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 4.8e-19 97.4 58 79.3
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 6.2e-19 97.1 66 71.2
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 1.4e-18 95.9 56 78.6
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 1.8e-18 95.5 55 78.2
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 4.0e-18 94.4 56 76.8
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 4.5e-17 90.9 56 73.2
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 7.6e-17 90.1 49 85.7
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 9.9e-17 89.7 47 87.2
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.7e-16 89.0 56 76.8
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.7e-16 89.0 56 76.8
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.7e-16 89.0 47 87.2
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 2.2e-16 88.6 47 87.2
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 3.8e-16 87.8 55 70.9
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.4e-15 84.0 55 70.9
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.4e-15 84.0 55 70.9
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 1.3e-13 79.3 41 97.6
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 2.3e-13 78.6 64 62.5
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 3.9e-13 77.8 48 81.2
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 9.6e-12 73.2 45 82.2
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 3.7e-11 71.2 53 64.2
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 5.3e-10 67.4 33 90.9
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 1.5e-09 65.9 62 50.0
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 7.6e-09 63.5 53 66.0


User provided reference genes

Program Settings