Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.5e-64 249.2 117 100.0
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 3.7e-58 228.0 120 90.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 2.2e-55 218.8 120 85.0
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.1e-54 216.5 121 85.1
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.9e-54 215.7 119 84.0
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.9e-54 215.7 119 84.0
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.2e-54 214.9 119 83.2
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 3.2e-54 214.9 119 82.4
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 4.2e-54 214.5 120 83.3
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 9.4e-54 213.4 119 82.4
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 9.4e-54 213.4 119 82.4
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 1.2e-53 213.0 119 82.4
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 2.7e-53 211.8 120 84.2
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 3.6e-53 211.5 116 82.8
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 4.7e-53 211.1 120 80.0
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 8.0e-53 210.3 120 80.8
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 3.0e-52 208.4 120 80.8
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 5.2e-52 207.6 120 80.8
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 6.7e-52 207.2 120 80.8
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.2e-51 206.5 120 81.7
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.2e-51 206.5 120 80.8
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.5e-51 206.1 120 81.7
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.5e-51 206.1 120 80.0
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 4.4e-51 204.5 120 80.0
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 4.4e-51 204.5 120 80.8
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 5.7e-51 204.1 118 80.5
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 7.5e-51 203.8 120 80.8
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 7.5e-51 203.8 120 80.0
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 9.7e-51 203.4 120 78.3
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 9.7e-51 203.4 120 79.2
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.7e-50 202.6 120 78.3
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.7e-50 202.6 120 79.2
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 79.2
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.2e-50 202.2 118 79.7
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 3.7e-50 201.4 120 80.0
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 4.8e-50 201.1 120 78.3
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 6.3e-50 200.7 123 79.7
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 6.3e-50 200.7 118 78.8
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 8.2e-50 200.3 123 78.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 8.2e-50 200.3 113 80.5
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.1e-49 199.9 120 78.3
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 1.4e-49 199.5 120 78.3
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.8e-49 199.1 118 79.7
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.8e-49 199.1 120 79.2
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.4e-49 198.7 120 78.3
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-49 198.7 122 79.5
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-49 198.7 122 79.5
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-49 198.7 122 79.5
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 4.1e-49 198.0 122 79.5
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 7.0e-49 197.2 120 77.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 9.1e-49 196.8 121 78.5
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.2e-48 196.4 122 78.7
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.6e-48 196.1 117 78.6
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.0e-48 195.7 120 76.7
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 4.5e-48 194.5 120 76.7
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 3.8e-47 191.4 120 74.2
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 5.0e-47 191.0 127 74.8
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 8.5e-47 190.3 118 74.6
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 2.5e-46 188.7 120 75.8
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 1.6e-45 186.0 125 70.4
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 4.7e-45 184.5 119 76.5
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 4.7e-45 184.5 121 76.0
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 8.0e-45 183.7 125 69.6
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.0e-44 183.3 116 72.4
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.4e-44 183.0 115 73.0
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 4.0e-44 181.4 116 72.4
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 4.0e-44 181.4 116 72.4
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 4.0e-44 181.4 116 72.4
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 4.0e-44 181.4 116 72.4
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 4.0e-44 181.4 118 70.3
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 8.8e-44 180.3 116 70.7
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 8.8e-44 180.3 116 71.6
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 8.8e-44 180.3 116 71.6
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.5e-43 179.5 116 70.7
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-43 179.5 116 70.7
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.5e-43 179.5 116 70.7
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.5e-43 179.5 137 66.4
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 2.0e-43 179.1 116 71.6
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 2.0e-43 179.1 116 70.7
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 2.0e-43 179.1 116 70.7
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 7.5e-43 177.2 116 70.7
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 7.5e-43 177.2 116 70.7
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 2.4e-41 172.2 91 90.1
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.7e-39 166.0 91 87.9
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 3.8e-39 164.9 91 86.8
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 8.6e-39 163.7 88 88.6
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 1.1e-38 163.3 92 83.7
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.9e-38 162.5 97 79.4
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.6e-37 159.5 113 65.5
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 2.8e-37 158.7 87 83.9
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 2.8e-37 158.7 88 83.0
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.4e-36 156.4 130 63.1
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.3e-36 155.6 87 82.8
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 4.0e-36 154.8 118 64.4
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 5.2e-36 154.5 114 61.4
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 6.8e-36 154.1 91 80.2
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.6e-35 152.1 86 80.2
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.3e-34 149.8 72 93.1
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 2.8e-34 148.7 88 79.5
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.4e-33 146.4 88 78.4
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.8e-33 146.0 75 89.3
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 3.1e-33 145.2 90 75.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 3.1e-33 145.2 90 75.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 3.1e-33 145.2 86 76.7
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 9.2e-33 143.7 84 79.8
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 2.7e-32 142.1 88 73.9
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.7e-32 142.1 115 61.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.7e-32 142.1 115 61.7
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 7.8e-32 140.6 86 75.6
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.1e-30 136.7 90 72.2
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.6e-29 131.7 96 67.7
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.0e-28 130.2 101 64.4
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 1.4e-28 129.8 100 64.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 5.2e-28 127.9 98 64.3
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 3.4e-27 125.2 88 63.6
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.5e-19 99.8 65 69.2
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 3.4e-19 98.6 54 81.5
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 5.4e-17 91.3 123 42.3
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 7.0e-17 90.9 117 45.3
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.3e-14 82.0 112 41.1
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 1.8e-12 76.3 128 33.6
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.8e-12 76.3 111 38.7
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 1.1e-09 67.0 30 93.3
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 2.4e-09 65.9 33 90.9
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.1e-08 62.8 31 87.1
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 8.6e-07 57.4 25 100.0


User provided reference genes

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