Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 5.7e-178 627.5 317 100.0
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 3.8e-142 508.4 320 80.6
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 2.3e-139 499.2 322 79.5
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.2e-116 423.7 318 67.3
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 1.2e-116 423.7 317 64.7
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 6.2e-116 421.4 272 72.1
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 1.4e-115 420.2 252 77.0
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 2.6e-114 416.0 272 71.7
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 3.7e-113 412.1 314 64.3
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 1.4e-112 410.2 314 65.6
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 2.4e-112 409.5 288 68.4
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 1.6e-111 406.8 314 65.0
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 3.5e-111 405.6 314 67.8
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 3.5e-111 405.6 300 64.7
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 3.5e-111 405.6 280 69.3
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 4.6e-111 405.2 252 74.6
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 1.3e-110 403.7 314 64.0
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 2.3e-110 402.9 252 75.0
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 2.3e-110 402.9 314 63.1
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 5.1e-110 401.7 314 65.0
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 8.6e-110 401.0 297 66.7
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 1.9e-109 399.8 252 73.4
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 1.9e-109 399.8 252 74.2
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 2.5e-109 399.4 317 65.3
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 3.3e-109 399.1 252 74.2
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 3.3e-109 399.1 268 68.3
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 4.3e-109 398.7 314 62.7
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 5.6e-109 398.3 266 70.7
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.6e-108 396.7 302 66.2
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 1.6e-108 396.7 252 74.2
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 1.6e-108 396.7 245 73.5
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 6.2e-108 394.8 317 61.2
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 6.8e-107 391.3 258 70.9
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 6.8e-107 391.3 317 60.9
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 1.2e-106 390.6 315 61.3
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.2e-106 390.6 317 60.6
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 1.5e-106 390.2 260 69.6
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 2.6e-106 389.4 229 76.9
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 7.6e-106 387.9 302 64.9
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 9.9e-106 387.5 319 61.4
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 1.3e-105 387.1 274 68.2
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 4.9e-105 385.2 319 61.1
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 4.9e-105 385.2 317 60.3
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 6.4e-105 384.8 314 60.8
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 6.4e-105 384.8 314 62.4
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 6.4e-105 384.8 281 64.1
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 1.4e-104 383.6 314 60.8
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 5.4e-104 381.7 254 70.5
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 9.2e-104 380.9 296 65.2
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 2.1e-103 379.8 250 70.4
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 2.7e-103 379.4 232 73.7
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 2.7e-103 379.4 232 73.7
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 3.5e-103 379.0 267 67.8
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 7.8e-103 377.9 229 76.0
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 1.0e-102 377.5 317 59.9
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 1.0e-102 377.5 325 60.0
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 1.0e-102 377.5 317 59.9
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 1.3e-102 377.1 312 60.3
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 2.3e-102 376.3 301 60.1
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 3.0e-102 375.9 291 63.6
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 6.6e-102 374.8 272 65.4
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 1.1e-101 374.0 232 74.6
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 1.1e-101 374.0 317 59.6
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 2.5e-101 372.9 252 71.4
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 5.6e-101 371.7 315 59.7
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 7.3e-101 371.3 276 64.1
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 7.3e-101 371.3 254 67.7
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 9.6e-101 370.9 274 63.9
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 5.2e-99 365.2 274 65.7
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.5e-98 363.6 313 59.4
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.5e-98 363.6 313 59.4
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 7.6e-98 361.3 255 66.3
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 7.6e-98 361.3 289 60.9
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 1.7e-97 360.1 323 56.7
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 8.4e-97 357.8 315 58.7
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 2.4e-96 356.3 255 67.8
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 2.1e-95 353.2 246 67.1
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 2.1e-95 353.2 291 58.4
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 2.7e-95 352.8 254 65.0
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 6.6e-94 348.2 292 61.6
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 8.7e-94 347.8 301 58.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 1.5e-93 347.1 277 62.5
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 1.6e-92 343.6 238 67.2
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 4.8e-92 342.0 277 60.6
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 1.4e-91 340.5 217 71.9
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 2.0e-90 336.7 254 63.4
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 4.5e-90 335.5 321 56.1
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 1.8e-86 323.6 248 62.1
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 6.7e-86 321.6 268 56.3
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 3.6e-84 315.8 288 55.6
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 4.0e-83 312.4 312 53.2
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 4.3e-77 292.4 248 56.9
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 6.9e-75 285.0 265 54.3
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 1.4e-72 277.3 254 53.9
Actinidia21156 Actinidia chinensis HOM05D006249 ORTHO05D007643 1.9e-72 276.9 280 52.9
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 2.7e-71 273.1 242 55.4
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 2.7e-71 273.1 181 68.5
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 3.3e-69 266.2 341 47.8
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 2.0e-66 256.9 150 75.3
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 1.1e-64 251.1 175 61.7
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 2.3e-62 243.4 176 66.5
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 3.9e-62 242.7 210 55.2
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.3e-54 216.9 173 59.0
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 3.4e-50 203.0 300 39.7
MCO14G208 Micromonas commoda HOM05D006249 ORTHO05D007643 7.9e-47 191.8 242 43.8
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 1.9e-40 170.6 198 44.9
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 1.9e-40 170.6 112 74.1
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 8.0e-39 165.2 157 53.5
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 1.6e-34 151.0 128 53.9
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 1.4e-30 137.9 106 55.7
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.2e-29 134.8 99 62.6
Medtr8g064430 Medicago truncatula HOM05D006249 ORTHO05D007643 1.7e-28 131.0 120 55.0
Glyma.03G158766 Glycine max HOM05D006249 ORTHO05D007643 7.0e-27 125.6 91 68.1
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 9.1e-27 125.2 98 59.2
Cfa022768 Carpinus fangiana HOM05D006249 ORTHO05D007643 7.7e-26 122.1 148 44.6
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 1.3e-25 121.3 119 51.3
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 6.5e-25 119.0 119 49.6
PRCOL_00003971 Prasinoderma coloniale HOM05D006249 ORTHO05D007643 2.8e-23 113.6 179 37.4
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 6.8e-22 109.0 63 73.0
SHI29847 Sapria himalayana HOM05D006249 ORTHO05D007643 8.3e-20 102.1 143 40.6
SHI34902 Sapria himalayana HOM05D006249 ORTHO05D007643 1.0e-17 95.1 155 38.1
CSS0005124 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 2.8e-15 87.0 56 71.4
SHI29011 Sapria himalayana HOM05D006249 ORTHO05D007643 5.2e-14 82.8 201 30.3
SHI16544 Sapria himalayana HOM05D006249 ORTHO05D007643 1.0e-09 68.6 116 37.1
SHI36882 Sapria himalayana HOM05D006249 ORTHO05D007643 3.9e-09 66.6 117 35.0
SHI04506 Sapria himalayana HOM05D006249 ORTHO05D007643 1.1e-08 65.1 119 32.8
SHI34501 Sapria himalayana HOM05D006249 ORTHO05D007643 1.9e-08 64.3 92 40.2
SHI36883 Sapria himalayana HOM05D006249 ORTHO05D007643 7.3e-08 62.4 56 50.0
SHI31647 Sapria himalayana HOM05D006249 ORTHO05D007643 2.8e-07 60.5 53 50.9
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 3.6e-07 60.1 50 60.0
SEGI_29111 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 8.0e-07 58.9 40 67.5
SHI43714 Sapria himalayana HOM05D000624 ORTHO05D007643 6.8e-06 55.8 49 55.1
SHI41947 Sapria himalayana HOM05D000624 ORTHO05D000495 8.9e-06 55.5 50 56.0


User provided reference genes

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