Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 6.3e-35 150.2 75 100.0
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 6.3e-35 150.2 75 100.0
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 3.1e-34 147.9 75 97.3
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 3.1e-34 147.9 75 97.3
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 3.1e-34 147.9 75 97.3
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 96.0
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 97.3
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 96.0
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 96.0
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 96.0
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 4.1e-34 147.5 75 97.3
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 5.3e-34 147.1 75 96.0
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 5.3e-34 147.1 75 98.7
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 6.9e-34 146.7 75 96.0
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 6.9e-34 146.7 74 95.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 9.1e-34 146.4 75 96.0
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 9.1e-34 146.4 75 94.7
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.2e-33 146.0 75 94.7
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 97.3
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 97.3
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 96.0
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 97.3
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 97.3
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 96.0
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 93.3
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.5e-33 145.6 75 97.3
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.6e-33 144.8 75 96.0
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.6e-33 144.8 75 93.3
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.6e-33 144.8 75 96.0
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.6e-33 144.8 75 96.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 94.7
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 94.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 96.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 96.0
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 96.0
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 3.4e-33 144.4 75 96.0
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.5e-33 144.1 75 94.7
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 5.9e-33 143.7 75 94.7
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 7.7e-33 143.3 75 94.7
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 7.7e-33 143.3 75 94.7
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 7.7e-33 143.3 75 94.7
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 7.7e-33 143.3 75 94.7
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.0e-32 142.9 75 93.3
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.0e-32 142.9 75 94.7
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.0e-32 142.9 75 94.7
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.0e-32 142.9 75 94.7
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.0e-32 142.9 75 94.7
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.3e-32 142.5 75 94.7
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.3e-32 142.5 75 93.3
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.3e-32 142.5 75 92.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.7e-32 142.1 75 93.3
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.7e-32 142.1 75 94.7
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 92.0
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 92.0
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 93.3
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 93.3
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 93.3
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.2e-32 141.7 75 93.3
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.9e-32 141.4 81 90.1
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.9e-32 141.4 81 90.1
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.8e-32 141.0 74 91.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 5.0e-32 140.6 75 90.7
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 6.5e-32 140.2 75 92.0
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 8.5e-32 139.8 75 90.7
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.5e-32 139.8 73 93.2
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.5e-32 139.8 73 93.2
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 8.5e-32 139.8 73 93.2
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 8.5e-32 139.8 75 90.7
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.1e-31 139.4 75 92.0
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.4e-31 139.0 75 92.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.9e-31 138.7 88 83.0
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.9e-31 138.7 88 83.0
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.5e-31 138.3 75 89.3
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 7.2e-31 136.7 75 89.3
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 7.2e-31 136.7 75 89.3
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 7.2e-31 136.7 75 89.3
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 7.2e-31 136.7 75 86.7
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 7.2e-31 136.7 74 89.2
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 4.7e-30 134.0 73 87.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 7.9e-30 133.3 73 87.7
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.4e-29 132.5 75 90.7
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.4e-29 132.5 74 86.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.4e-29 132.5 94 74.5
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 2.3e-29 131.7 75 89.3
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 8.8e-29 129.8 75 88.0
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 4.4e-28 127.5 62 100.0
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.3e-27 125.9 75 78.7
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.7e-27 124.4 62 95.2
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 4.1e-26 120.9 115 62.6
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 1.2e-25 119.4 73 79.5
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.5e-25 119.0 69 85.5
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.0e-25 118.6 81 80.2
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 3.8e-24 114.4 67 86.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 3.2e-23 111.3 56 96.4
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 7.2e-23 110.2 56 94.6
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 9.7e-20 99.8 74 63.5
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.1e-18 94.4 45 97.8
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.6e-17 92.4 45 97.8
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 2.0e-17 92.0 45 95.6
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 2.6e-17 91.7 45 95.6
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 7.7e-17 90.1 45 93.3
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.5e-15 85.9 70 55.7
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 6.3e-11 70.5 75 58.7
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-10 68.6 74 55.4
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 4.1e-10 67.8 75 54.7
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.0e-09 65.5 35 85.7
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 4.5e-09 64.3 75 52.0
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.9e-07 58.9 59 59.3


User provided reference genes

Program Settings