Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.3e-284 980.7 515 100.0
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.1e-207 726.9 516 74.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 3.2e-207 725.3 516 73.8
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.4e-205 719.9 518 71.6
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 5.8e-172 608.2 514 61.5
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 5.8e-164 581.6 514 58.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 2.1e-161 573.2 518 58.5
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.7e-161 572.8 518 58.5
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.9e-160 568.9 513 57.5
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 3.3e-159 565.8 518 57.9
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 3.3e-159 565.8 518 57.9
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 9.6e-159 564.3 513 56.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.7e-155 553.5 479 59.3
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 3.2e-154 549.3 514 55.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 4.2e-154 548.9 515 56.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.7e-153 546.2 496 59.9
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 7.8e-153 544.7 515 56.5
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.3e-152 543.9 519 58.0
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.0e-152 542.7 514 54.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 3.3e-151 539.3 518 57.1
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.3e-150 537.3 510 52.9
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.6e-150 535.8 515 54.8
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.8e-149 533.5 510 55.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 4.0e-149 532.3 510 55.9
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.2e-148 530.8 510 54.7
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.3e-147 527.3 516 56.6
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.3e-147 527.3 533 52.3
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.2e-147 526.6 510 54.3
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.9e-146 523.5 432 60.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.7e-145 519.6 516 51.7
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.1e-143 514.2 504 54.2
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.4e-143 511.5 514 51.8
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 2.1e-142 510.0 516 50.4
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.1e-141 507.7 515 53.8
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.5e-140 503.8 515 54.0
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 7.6e-140 501.5 524 53.8
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.9e-139 498.8 514 52.7
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 8.4e-139 498.0 519 54.9
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 3.2e-138 496.1 515 51.5
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.2e-138 495.7 512 50.8
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 7.1e-138 495.0 496 55.4
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.5e-137 492.7 511 50.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.0e-136 491.1 513 49.5
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 5.6e-135 485.3 519 52.6
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 9.6e-135 484.6 517 51.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 9.6e-135 484.6 493 52.7
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.3e-134 484.2 511 50.1
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.3e-134 484.2 510 50.8
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.1e-134 483.4 516 52.3
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.8e-134 482.3 511 50.1
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.4e-133 480.7 495 53.5
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.2e-132 477.6 511 48.3
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 4.5e-132 475.7 518 48.3
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.7e-131 473.8 495 51.7
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.7e-131 473.8 510 49.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.2e-131 473.4 519 52.2
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 2.9e-131 473.0 500 53.2
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 3.8e-131 472.6 519 52.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.8e-131 472.6 518 52.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.5e-131 471.9 512 48.6
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 1.9e-130 470.3 520 51.9
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 9.3e-130 468.0 510 51.2
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.3e-130 468.0 510 48.2
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 2.1e-129 466.8 515 50.5
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 4.6e-129 465.7 518 50.4
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 4.6e-129 465.7 516 49.8
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 6.1e-129 465.3 514 51.0
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.3e-128 464.2 493 51.7
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.0e-128 463.0 518 48.6
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 3.9e-128 462.6 494 49.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 5.1e-128 462.2 494 48.6
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 4.3e-127 459.1 516 49.2
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 9.7e-127 458.0 493 50.1
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.6e-126 457.2 493 49.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.2e-126 456.8 519 52.2
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.8e-126 456.4 494 49.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 8.2e-126 454.9 498 50.4
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.1e-125 454.5 511 51.3
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.1e-125 454.5 518 49.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.1e-125 454.5 515 45.8
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 6.9e-125 451.8 496 49.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 3.4e-124 449.5 517 51.5
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 7.7e-124 448.4 512 43.9
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.3e-123 447.6 514 50.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.2e-122 442.6 496 49.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 5.5e-122 442.2 524 49.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 9.4e-122 441.4 505 50.7
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.4e-120 437.6 504 49.8
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.5e-119 433.3 496 48.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 3.1e-117 426.4 342 60.5
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.0e-116 423.7 495 47.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 6.1e-113 412.1 522 46.6
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.0e-112 411.4 389 56.3
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.6e-105 387.5 524 44.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.1e-105 387.1 513 44.4
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 7.4e-103 378.6 464 51.1
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 7.4e-103 378.6 494 45.3
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.1e-101 374.8 398 51.3
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.1e-93 346.7 333 51.4
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.1e-90 338.2 392 46.2
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.4e-85 319.3 268 57.5
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.4e-79 299.7 349 48.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 9.2e-77 292.0 327 51.7
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-68 265.0 198 63.1
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-68 265.0 198 63.1
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.5e-66 258.1 219 57.5
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 4.0e-64 250.0 533 33.2
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.0e-60 236.1 530 31.9
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 6.2e-57 226.1 157 63.1
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 8.9e-56 222.2 509 29.1
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 8.1e-49 199.1 423 31.7
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.9e-38 164.1 272 34.2
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 6.4e-38 162.9 197 50.3
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 3.8e-30 137.1 142 49.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 8.4e-30 136.0 142 49.3
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 3.2e-29 134.0 116 57.8
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-26 125.6 175 46.9
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.4e-24 117.9 115 49.6
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 2.2e-22 111.3 115 48.7
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 5.1e-19 100.1 122 41.8
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 5.7e-18 96.7 173 33.5
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 8.2e-17 92.8 224 29.9
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 9.0e-16 89.4 116 44.0
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 7.4e-10 69.7 49 65.3


User provided reference genes

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