Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 6.3e-297 1023.5 567 100.0
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 2.1e-244 849.0 539 88.1
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 1.8e-230 802.7 451 90.2
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.5e-221 772.3 527 80.5
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.7e-220 769.6 492 79.9
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 1.8e-219 766.1 542 78.0
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 9.1e-219 763.8 544 78.1
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 1.2e-218 763.5 507 78.5
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 2.0e-218 762.7 542 77.5
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 2.6e-218 762.3 454 84.4
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 2.2e-217 759.2 519 78.6
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 6.5e-217 757.7 552 76.4
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 8.5e-217 757.3 560 78.8
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 2.5e-216 755.7 543 76.6
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 3.2e-216 755.4 534 78.8
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 9.4e-216 753.8 542 77.5
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 9.4e-216 753.8 560 75.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 1.6e-215 753.1 555 77.8
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 2.1e-215 752.7 538 81.4
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.0e-214 750.4 525 79.4
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 3.9e-214 748.4 543 74.8
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 5.1e-214 748.0 541 75.4
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 2.0e-213 746.1 465 80.6
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 3.3e-213 745.3 467 80.9
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 1.7e-212 743.0 542 76.6
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 2.8e-212 742.3 540 76.5
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 1.1e-211 740.3 563 74.8
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.8e-211 739.6 525 76.8
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 2.4e-211 739.2 536 79.7
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 5.3e-211 738.0 467 80.5
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 7.0e-211 737.6 552 75.2
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.2e-210 736.9 436 83.7
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 2.0e-210 736.1 494 78.1
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 5.9e-210 734.6 536 75.6
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 1.0e-209 733.8 546 78.4
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 2.2e-209 732.6 471 79.0
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 2.9e-209 732.3 541 77.6
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 1.1e-208 730.3 531 76.5
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 1.9e-208 729.6 547 76.2
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 2.5e-208 729.2 531 77.8
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 7.2e-208 727.6 520 77.5
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 7.2e-208 727.6 540 77.2
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 4.7e-207 724.9 552 71.4
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.0e-206 723.8 521 72.6
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.4e-206 723.4 555 69.0
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 5.2e-206 721.5 501 76.4
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 3.3e-205 718.8 468 78.0
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 1.3e-204 716.8 479 77.5
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 2.8e-204 715.7 437 80.5
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 6.3e-204 714.5 529 77.1
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 3.1e-203 712.2 528 76.5
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 5.3e-203 711.4 522 77.0
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 7.0e-203 711.1 524 77.1
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 3.5e-202 708.8 561 72.7
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 1.0e-201 707.2 529 76.6
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 1.3e-201 706.8 528 76.3
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 1.3e-201 706.8 450 78.9
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 1.7e-201 706.4 523 77.1
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 2.2e-201 706.1 529 75.2
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 6.5e-201 704.5 543 70.7
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 2.5e-200 702.6 448 78.8
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 5.5e-200 701.4 533 72.6
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 2.7e-199 699.1 543 70.0
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 4.7e-199 698.4 522 75.3
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 6.1e-199 698.0 429 81.1
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.5e-197 693.3 463 77.8
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 2.0e-197 693.0 526 72.2
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 1.3e-196 690.3 530 74.5
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 6.3e-196 688.0 563 73.2
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 1.7e-193 679.9 450 77.1
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 3.2e-192 675.6 490 73.7
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 2.7e-191 672.5 545 69.9
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 8.0e-191 671.0 548 65.1
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.8e-190 669.8 474 74.7
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 4.0e-190 668.7 443 75.4
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 6.8e-190 667.9 548 71.0
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.6e-189 666.0 432 77.3
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 7.5e-189 664.5 494 68.4
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 3.7e-188 662.1 432 77.3
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 4.8e-188 661.8 430 77.4
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.1e-187 660.6 547 72.2
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 1.1e-187 660.6 451 73.8
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.4e-187 660.2 448 75.2
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 5.4e-187 658.3 505 70.9
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 5.4e-187 658.3 451 73.6
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.2e-186 657.1 497 70.4
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.6e-186 656.8 434 75.1
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 1.6e-186 656.8 437 75.5
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 1.6e-186 656.8 437 75.5
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 5.9e-186 654.8 467 73.4
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 1.1e-184 650.6 449 73.3
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 5.5e-184 648.3 454 74.2
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 1.6e-183 646.7 505 70.1
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.8e-183 646.0 534 72.1
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.0e-182 642.1 496 72.0
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 2.0e-181 639.8 433 74.8
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 1.8e-174 616.7 540 68.1
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 2.3e-174 616.3 544 67.3
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.2e-172 609.8 354 84.2
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.4e-171 607.1 437 71.9
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 2.0e-170 603.2 433 70.4
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 2.0e-170 603.2 560 61.6
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 3.0e-169 599.4 396 77.5
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 4.3e-168 595.5 521 62.2
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 7.3e-168 594.7 481 65.5
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.6e-167 593.6 432 68.3
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 3.1e-166 589.3 556 62.9
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 3.1e-166 589.3 556 63.5
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 4.9e-164 582.0 464 66.2
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 4.9e-164 582.0 498 64.3
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 4.9e-164 582.0 483 63.8
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 2.1e-162 576.6 566 59.9
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 8.6e-161 571.2 392 75.5
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 1.6e-159 567.0 416 72.8
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 2.3e-158 563.1 453 72.4
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 3.0e-153 546.2 382 75.1
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 1.6e-151 540.4 459 62.3
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 2.2e-148 530.0 475 60.0
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.9e-147 526.9 475 59.4
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 6.0e-146 521.9 422 63.3
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 1.4e-142 510.8 414 65.7
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 7.3e-136 488.4 490 56.1
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.1e-131 474.6 382 65.7
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 2.4e-131 473.4 534 52.4
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 6.0e-130 468.8 343 67.9
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 1.8e-129 467.2 396 59.3
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 1.9e-128 463.8 494 54.0
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 4.8e-127 459.1 362 67.1
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 8.1e-127 458.4 460 54.6
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 6.9e-126 455.3 387 62.8
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 3.2e-123 446.4 382 63.6
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 5.1e-121 439.1 480 50.4
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 1.5e-120 437.6 421 58.0
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 2.6e-117 426.8 689 41.2
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 5.8e-117 425.6 419 58.0
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 4.6e-114 416.0 501 51.3
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 8.7e-113 411.8 400 53.8
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 2.5e-107 393.7 346 59.2
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 5.1e-105 386.0 457 52.1
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.5e-99 367.1 382 60.2
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 1.2e-98 364.8 469 47.3
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 1.6e-98 364.4 282 68.4
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 1.7e-95 354.4 487 45.2
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 2.9e-92 343.6 261 71.6
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 1.1e-91 341.7 318 57.5
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 1.4e-89 334.7 415 47.0
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 1.8e-81 307.8 403 42.2
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 4.5e-77 293.1 286 55.6
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 4.2e-75 286.6 267 67.8
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.2e-74 285.0 438 40.2
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 3.1e-70 270.4 184 74.5
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 3.5e-69 266.9 356 47.2
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 4.0e-57 226.9 291 48.5
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 9.2e-38 162.5 95 77.9
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 1.2e-29 135.6 99 66.7
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 7.8e-29 132.9 88 79.5
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 7.3e-27 126.3 247 37.2
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 1.3e-26 125.6 106 63.2
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.8e-26 124.4 93 74.2
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 4.8e-26 123.6 93 71.0
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 1.3e-23 115.5 136 55.1
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 9.3e-22 109.4 148 43.9
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 1.2e-21 109.0 123 51.2
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.0e-20 104.4 71 71.8
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 9.6e-19 99.4 155 45.8
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 3.6e-18 97.4 203 38.4
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 4.8e-18 97.1 75 61.3
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 6.2e-18 96.7 133 47.4
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 8.1e-18 96.3 83 60.2
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 4.5e-16 90.5 45 88.9
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 7.6e-16 89.7 46 93.5
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 9.9e-16 89.4 133 45.9
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 1.3e-15 89.0 156 35.3
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 2.1e-13 81.6 145 39.3
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 2.8e-10 71.2 97 45.4
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 2.4e-09 68.2 51 62.7
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 5.3e-09 67.0 199 25.1
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 5.8e-08 63.5 285 24.2
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 7.6e-08 63.2 321 21.5
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 4.9e-07 60.5 202 24.3
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 2.5e-06 58.2 199 24.6
FAN25G1437 Fragaria x ananassa HOM05D003858 ORTHO05D202310 9.3e-06 56.2 78 44.9


User provided reference genes

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