Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 1.9e-257 892.1 480 100.0
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 8.9e-159 564.3 485 69.3
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.1e-145 520.8 493 65.1
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 7.7e-110 401.7 366 59.3
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 1.4e-108 397.5 443 52.1
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 8.2e-104 381.7 476 52.9
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 2.4e-103 380.2 479 54.3
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 2.0e-102 377.1 479 53.4
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.9e-100 370.5 492 53.0
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 4.2e-100 369.4 477 52.8
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 1.2e-99 367.9 495 52.5
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 6.7e-98 362.1 471 52.2
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 8.8e-98 361.7 471 52.2
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 8.8e-98 361.7 482 51.2
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 2.6e-97 360.1 469 53.3
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 4.4e-97 359.4 477 52.2
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 9.7e-97 358.2 478 49.2
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 8.2e-96 355.1 476 49.6
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.8e-95 354.0 499 51.9
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 2.4e-95 353.6 467 49.7
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 7.0e-95 352.1 473 51.4
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 7.7e-94 348.6 400 51.8
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 1.5e-92 344.4 385 52.2
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 1.9e-92 344.0 482 49.8
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 2.5e-92 343.6 483 50.1
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 1.2e-91 341.3 467 50.3
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.1e-91 340.5 482 49.4
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 2.7e-91 340.1 352 54.3
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 4.7e-91 339.3 506 47.2
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 4.7e-91 339.3 473 49.5
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 5.2e-90 335.9 505 47.1
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 6.7e-90 335.5 475 47.6
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 1.1e-89 334.7 480 44.0
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 1.1e-89 334.7 378 50.5
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.5e-89 334.3 475 48.8
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 4.4e-89 332.8 371 51.2
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 7.5e-89 332.0 476 49.8
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 3.7e-88 329.7 472 47.9
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.4e-87 327.8 509 46.2
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.8e-87 327.4 522 44.6
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 1.8e-87 327.4 380 50.5
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 2.4e-87 327.0 485 47.8
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.0e-85 321.6 501 47.9
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.3e-85 321.2 481 48.0
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 3.8e-85 319.7 471 46.7
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 6.5e-85 318.9 478 46.0
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.5e-84 317.8 468 47.0
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 1.9e-84 317.4 483 46.8
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 7.2e-84 315.5 425 45.6
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 9.4e-84 315.1 502 46.6
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 2.7e-83 313.5 478 42.9
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 3.0e-82 310.1 304 56.6
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 3.4e-81 306.6 515 43.3
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 2.8e-80 303.5 514 45.7
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 6.3e-80 302.4 539 45.5
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 6.3e-80 302.4 497 39.0
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 2.4e-79 300.4 379 47.5
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 5.4e-79 299.3 475 45.1
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 7.0e-79 298.9 551 41.6
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 2.7e-78 297.0 481 46.6
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 4.5e-78 296.2 474 45.8
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 8.5e-77 292.0 350 48.9
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.9e-76 290.8 268 58.6
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 5.5e-76 289.3 530 42.3
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 1.6e-75 287.7 503 38.8
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 3.6e-75 286.6 343 48.7
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 8.0e-75 285.4 530 42.1
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 1.0e-74 285.0 358 47.2
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 1.0e-74 285.0 358 47.2
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 2.3e-74 283.9 396 45.2
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 3.0e-74 283.5 532 42.3
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 4.0e-74 283.1 474 44.1
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.5e-73 281.2 361 46.5
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 5.7e-73 279.3 498 46.6
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 3.5e-70 270.0 454 45.8
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 7.7e-70 268.9 517 42.6
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 2.3e-69 267.3 380 41.8
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.9e-68 264.2 424 39.6
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 2.8e-67 260.4 378 42.6
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.3e-66 257.3 269 51.3
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 9.8e-65 251.9 472 41.9
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 3.0e-61 240.4 519 40.5
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 8.6e-61 238.8 465 36.8
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 3.3e-60 236.9 347 49.3
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 2.1e-59 234.2 271 49.4
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 3.6e-59 233.4 475 40.4
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 7.0e-55 219.2 483 39.3
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 9.8e-49 198.7 283 43.8
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 4.9e-48 196.4 324 46.0
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.0e-45 188.7 207 51.7
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.7e-45 188.0 473 38.3
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 6.8e-42 176.0 337 34.1
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 2.0e-41 174.5 327 35.2
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 8.4e-40 169.1 276 38.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 7.1e-39 166.0 293 46.1
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 2.7e-38 164.1 537 29.1
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 1.7e-37 161.4 174 52.3
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 3.9e-37 160.2 210 45.7
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 4.7e-35 153.3 324 42.9
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 5.1e-29 133.3 142 50.0
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 9.6e-28 129.0 103 65.0
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 5.3e-26 123.2 404 27.5
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.0e-21 107.5 107 53.3
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.1e-19 99.4 65 70.8
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 3.1e-18 97.4 184 37.5
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 4.9e-16 90.1 217 47.5
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.5e-14 84.0 65 63.1
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.4e-10 72.0 96 45.8
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 2.4e-10 71.2 257 26.5
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 1.9e-07 61.6 115 38.3
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 1.6e-06 58.5 143 32.2
PSO782G4681 Papaver somniferum HOM05D005384 ORTHO05D006477 3.5e-06 57.4 143 32.2


User provided reference genes

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