Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G4058 Erigeron canadensis HOM05D001221 ORTHO05D009285 5.2e-116 421.0 205 100.0
ECA247G4014 Erigeron canadensis HOM05D001221 ORTHO05D009285 2.3e-31 139.8 76 92.1
Lsat_1_v5_gn_9_35920 Lactuca sativa HOM05D001221 ORTHO05D009285 3.1e-28 129.4 76 84.2
DCAR_028823 Daucus carota HOM05D001221 ORTHO05D009285 5.4e-20 102.1 76 68.4
ECA247G2539 Erigeron canadensis HOM05D005076 ORTHO05D004974 5.4e-20 102.1 90 60.0
Manes.09G103400 Manihot esculenta HOM05D001221 ORTHO05D009285 9.1e-20 101.3 80 63.8
ECA247G1261 Erigeron canadensis HOM05D005076 ORTHO05D004974 2.0e-19 100.1 84 63.1
Prupe.6G272700 Prunus persica HOM05D001221 ORTHO05D009285 2.7e-19 99.8 81 63.0
ECA247G0137 Erigeron canadensis HOM05D005076 ORTHO05D004974 5.9e-19 98.6 84 61.9
RcHm_v2.0_Chr3g0463601 Rosa chinensis HOM05D001221 ORTHO05D009285 1.0e-18 97.8 77 63.6
Lj2C77T2 Lonicera japonica HOM05D001221 ORTHO05D009285 1.3e-18 97.4 79 60.8
MD12G1162000 Malus domestica HOM05D001221 ORTHO05D009285 2.3e-18 96.7 77 63.6
Sopen09g007240 Solanum pennellii HOM05D001221 ORTHO05D009285 2.3e-18 96.7 84 59.5
MD04G1148400 Malus domestica HOM05D001221 ORTHO05D009285 5.0e-18 95.5 76 64.5
CAN.G703.5 Capsicum annuum HOM05D001221 ORTHO05D009285 6.5e-18 95.1 84 57.1
ECA247G2128 Erigeron canadensis HOM05D005076 ORTHO05D004974 6.5e-18 95.1 82 62.2
ECA332G0001 Erigeron canadensis HOM05D005076 ORTHO05D004974 6.5e-18 95.1 82 62.2
FvH4_6g11860 Fragaria vesca HOM05D001221 ORTHO05D009285 6.5e-18 95.1 77 62.3
FAN14G0895 Fragaria x ananassa HOM05D001221 ORTHO05D009285 6.5e-18 95.1 77 62.3
Oeu030516.1 Olea europaea HOM05D001221 ORTHO05D009285 8.6e-18 94.7 76 60.5
Phvul.002G155200 Phaseolus vulgaris HOM05D001221 ORTHO05D009285 8.6e-18 94.7 100 54.0
TWI60G0701 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 8.6e-18 94.7 77 61.0
Cc00_g18180 Coffea canephora HOM05D001221 ORTHO05D009285 1.1e-17 94.4 80 60.0
Atru.chr8.2211 Acer truncatum HOM05D001221 ORTHO05D009285 1.5e-17 94.0 73 64.4
CSS0000018 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 1.9e-17 93.6 79 60.8
CSS0034566 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 1.9e-17 93.6 79 60.8
PGSC0003DMG400008495 Solanum tuberosum HOM05D001221 ORTHO05D009285 1.9e-17 93.6 84 57.1
VMungo1215G0061 Vigna mungo HOM05D001221 ORTHO05D009285 1.9e-17 93.6 81 60.5
Lj3g0014679 Lotus japonicus HOM05D001221 ORTHO05D009285 3.2e-17 92.8 113 47.8
Cfa010721 Carpinus fangiana HOM05D001221 ORTHO05D009285 4.2e-17 92.4 116 46.6
Haze_03252 Corylus avellana HOM05D001221 ORTHO05D009285 5.5e-17 92.0 116 47.4
Rhsim05G0207300 Rhododendron simsii HOM05D001221 ORTHO05D009285 7.2e-17 91.7 80 57.5
Nitab4.5_0011703g0010 Nicotiana tabacum HOM05D001221 ORTHO05D009285 9.5e-17 91.3 88 56.8
Potri.016G112900 Populus trichocarpa HOM05D001221 ORTHO05D009285 9.5e-17 91.3 77 57.1
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 1.2e-16 90.9 75 65.3
Actinidia29122 Actinidia chinensis HOM05D001221 ORTHO05D009285 1.6e-16 90.5 79 57.0
MSTRG.19022 Avicennia marina HOM05D001221 ORTHO05D009285 1.6e-16 90.5 74 63.5
Lalb_Chr07g0193891 Lupinus albus HOM05D001221 ORTHO05D009285 1.6e-16 90.5 75 61.3
Nitab4.5_0000008g0890 Nicotiana tabacum HOM05D001221 ORTHO05D009285 1.6e-16 90.5 84 56.0
Glyma.08G119100 Glycine max HOM05D001221 ORTHO05D009285 2.1e-16 90.1 74 63.5
TAR369G0855 Trochodendron aralioides HOM05D001221 ORTHO05D009285 2.1e-16 90.1 77 58.4
PGR042G0922 Punica granatum HOM05D001221 ORTHO05D009285 3.6e-16 89.4 78 57.7
Sabra16G0108600 Salix brachista HOM05D001221 ORTHO05D009285 3.6e-16 89.4 81 58.0
CiPaw.09G207400 Carya illinoinensis HOM05D001221 ORTHO05D009285 4.7e-16 89.0 79 58.2
TWI34G0521 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 6.1e-16 88.6 77 58.4
Thecc.10G136500 Theobroma cacao HOM05D001221 ORTHO05D009285 8.0e-16 88.2 76 57.9
Ca_08338_v3 Cicer arietinum L. HOM05D001221 ORTHO05D009285 1.0e-15 87.8 78 60.3
Migut.J00190 Erythranthe guttata HOM05D001221 ORTHO05D009285 1.0e-15 87.8 73 60.3
arahy.Tifrunner.gnm1.ann1.8M171Q Arachis hypogaea HOM05D001221 ORTHO05D009285 4.0e-15 85.9 75 61.3
arahy.Tifrunner.gnm1.ann1.V4YX5W Arachis hypogaea HOM05D001221 ORTHO05D009285 4.0e-15 85.9 75 61.3
COL.COLO4_02741 Corchorus olitorius HOM05D001221 ORTHO05D009285 4.0e-15 85.9 86 53.5
Gohir.A06G173400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 4.0e-15 85.9 80 56.2
Gohir.D06G183400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 4.0e-15 85.9 81 55.6
Gorai.010G214400 Gossypium raimondii HOM05D001221 ORTHO05D009285 4.0e-15 85.9 81 55.6
Nn2g14026 Nelumbo nucifera HOM05D001221 ORTHO05D009285 4.0e-15 85.9 77 54.5
GSVIVG01033992001 Vitis vinifera HOM05D001221 ORTHO05D009285 5.2e-15 85.5 79 53.2
CsaV3_4G026220 Cucumis sativus L. HOM05D001221 ORTHO05D009285 6.8e-15 85.1 79 54.4
THA.LOC104816213 Tarenaya hassleriana HOM05D001221 ORTHO05D009285 6.8e-15 85.1 73 58.9
FAN05G4573 Fragaria x ananassa HOM05D001221 ORTHO05D009285 1.5e-14 84.0 69 62.3
Medtr7g088170 Medicago truncatula HOM05D001221 ORTHO05D009285 2.0e-14 83.6 81 53.1
FAN14G4172 Fragaria x ananassa HOM05D001221 ORTHO05D009285 2.6e-14 83.2 69 62.3
FAN14G5805 Fragaria x ananassa HOM05D001221 ORTHO05D009285 2.6e-14 83.2 69 62.3
TPR.G23659 Trifolium pratense HOM05D001221 ORTHO05D009285 3.4e-14 82.8 78 55.1
unitig_27.g24844 Utricularia gibba HOM05D001221 ORTHO05D009285 3.4e-14 82.8 76 52.6
Ciclev10011651m.g Citrus clementina HOM05D001221 ORTHO05D009285 4.4e-14 82.4 77 55.8
Psat3g083200 Pisum sativum HOM05D001221 ORTHO05D009285 5.7e-14 82.0 78 56.4
Sed0009696 Sechium edule HOM05D001221 ORTHO05D009285 5.7e-14 82.0 75 60.0
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 7.5e-14 81.6 71 59.2
FAN02G1926 Fragaria x ananassa HOM05D001221 ORTHO05D009285 7.5e-14 81.6 69 60.9
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 9.8e-14 81.3 72 58.3
Hma1.2p1_0244F.1_g101310 Hydrangea macrophylla HOM05D001221 ORTHO05D009285 1.3e-13 80.9 76 52.6
Aa31LG3G1560 Aethionema arabicum HOM05D001221 ORTHO05D009285 1.7e-13 80.5 76 51.3
MELO3C003302.2 Cucumis melo HOM05D001221 ORTHO05D009285 1.7e-13 80.5 79 51.9
EL10Ac6g14011 Beta vulgaris HOM05D001221 ORTHO05D009285 1.4e-12 77.4 76 53.9
AUR62041939 Chenopodium quinoa HOM05D001221 ORTHO05D009285 1.4e-12 77.4 79 53.2
SHI12823 Sapria himalayana HOM05D001221 ORTHO05D009285 1.4e-12 77.4 77 53.2
Aqoxy2G03089 Aquilegia oxysepala HOM05D001221 ORTHO05D009285 1.2e-11 74.3 79 48.1
AUR62032469 Chenopodium quinoa HOM05D001221 ORTHO05D009285 1.2e-11 74.3 65 61.5
Sp3g07450 Schrenkiella parvula HOM05D001221 ORTHO05D009285 7.8e-11 71.6 76 51.3
BcaB07g31624 Brassica carinata HOM05D001221 ORTHO05D009285 1.3e-10 70.9 73 50.7
PSO384G2279 Papaver somniferum HOM05D001221 ORTHO05D009285 1.3e-10 70.9 83 47.0
BraA05t22767Z Brassica rapa HOM05D001221 ORTHO05D009285 1.7e-10 70.5 73 49.3
Carub.0003s0816 Capsella rubella HOM05D001221 ORTHO05D009285 1.7e-10 70.5 76 50.0
CDE04G2724 Ceratophyllum demersum HOM05D001986 ORTHO05D009285 2.3e-10 70.1 71 53.5
HPP92_012633 Vanilla planifolia HOM05D001221 ORTHO05D009285 2.3e-10 70.1 97 38.1
BcaC05g29636 Brassica carinata HOM05D001221 ORTHO05D009285 5.0e-10 68.9 73 47.9
A05p39830 Brassica napus HOM05D001221 ORTHO05D009285 5.0e-10 68.9 73 47.9
C05p58870 Brassica napus HOM05D001221 ORTHO05D009285 5.0e-10 68.9 73 47.9
AL3G20060 Arabidopsis lyrata HOM05D001221 ORTHO05D009285 6.6e-10 68.6 76 48.7
BolC5t34539H Brassica oleracea HOM05D001221 ORTHO05D009285 6.6e-10 68.6 73 47.9
AT3G09030 Arabidopsis thaliana HOM05D001221 ORTHO05D009285 8.6e-10 68.2 76 47.4
Zm00001eb398010 Zea mays HOM05D001221 ORTHO05D009285 8.6e-10 68.2 89 38.2
CARHR083370 Cardamine hirsuta HOM05D001221 ORTHO05D009285 1.1e-09 67.8 76 47.4
Os03g0264700 Oryza sativa ssp. japonica HOM05D001221 ORTHO05D009285 1.1e-09 67.8 89 40.4
Thhalv10020689m.g Eutrema salsugineum HOM05D001221 ORTHO05D009285 1.5e-09 67.4 76 48.7
ECA247G3193 Erigeron canadensis HOM05D005076 ORTHO05D004974 7.3e-09 65.1 61 52.5
Nitab4.5_0003567g0090 Nicotiana tabacum HOM05D001221 ORTHO05D009285 1.8e-07 60.5 64 51.6
MELO3C005687.2 Cucumis melo HOM05D001221 ORTHO05D006671 5.2e-07 58.9 78 38.5
Potri.003G129300 Populus trichocarpa HOM05D001221 ORTHO05D006671 6.8e-07 58.5 77 36.4
ClCG01G002590 Citrullus lanatus HOM05D001221 ORTHO05D006671 8.9e-07 58.2 104 35.6
ECA233G2112 Erigeron canadensis HOM05D000188 ORTHO05D000362 8.9e-07 58.2 60 53.3
CsaV3_5G002700 Cucumis sativus L. HOM05D001221 ORTHO05D006671 1.2e-06 57.8 79 39.2
Potri.001G102300 Populus trichocarpa HOM05D001221 ORTHO05D006671 1.2e-06 57.8 77 37.7
Manes.02G020701 Manihot esculenta HOM05D001221 ORTHO05D006671 1.5e-06 57.4 77 36.4
CSS0031672 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D006671 2.6e-06 56.6 79 40.5
ECA247G1615 Erigeron canadensis HOM05D005076 ORTHO05D004974 3.4e-06 56.2 56 50.0
Eucgr.E00629 Eucalyptus grandis HOM05D001221 ORTHO05D006671 3.4e-06 56.2 77 36.4
Thhalv10027773m.g Eutrema salsugineum HOM05D001221 ORTHO05D006671 4.4e-06 55.8 76 40.8
CARHR212990 Cardamine hirsuta HOM05D001221 ORTHO05D006671 5.7e-06 55.5 76 39.5
Migut.E01082 Erythranthe guttata HOM05D001221 ORTHO05D006671 5.7e-06 55.5 75 36.0
DCAR_008375 Daucus carota HOM05D001221 ORTHO05D006671 7.5e-06 55.1 80 41.2
Lsat_1_v5_gn_6_86460 Lactuca sativa HOM05D001221 ORTHO05D006671 7.5e-06 55.1 74 36.5
Lj4g0007712 Lotus japonicus HOM05D001221 ORTHO05D006671 7.5e-06 55.1 82 36.6
MSTRG.25621 Avicennia marina HOM05D001221 ORTHO05D006671 9.8e-06 54.7 78 38.5
CANSAT21G0250 Cannabis sativa HOM05D001221 ORTHO05D006671 9.8e-06 54.7 77 35.1
Sp7g00610 Schrenkiella parvula HOM05D001221 ORTHO05D006671 9.8e-06 54.7 76 39.5
SpUn0010_0090 Schrenkiella parvula HOM05D001221 ORTHO05D006671 9.8e-06 54.7 76 39.5


User provided reference genes

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