Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 2.7e-129 465.3 228 100.0
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 6.9e-101 370.9 227 77.1
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 9.0e-101 370.5 215 81.4
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 2.8e-86 322.4 228 67.1
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 9.0e-85 317.4 227 66.5
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.0e-83 313.9 219 68.9
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.7e-83 313.2 206 68.9
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 2.9e-83 312.4 219 67.1
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 2.9e-83 312.4 219 68.5
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 2.9e-83 312.4 219 68.5
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 6.5e-83 311.2 225 65.3
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 8.4e-83 310.8 206 68.9
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.4e-82 310.1 216 67.1
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.9e-82 309.7 229 64.2
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 1.6e-81 306.6 206 68.0
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.1e-81 306.2 215 66.5
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.1e-81 306.2 225 64.0
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.3e-80 303.5 228 62.7
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.1e-79 300.4 225 62.7
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 1.5e-79 300.1 210 66.2
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.9e-79 299.7 228 61.8
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.9e-79 299.7 208 66.3
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 2.5e-79 299.3 219 63.9
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 7.4e-79 297.7 210 67.6
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.3e-78 297.0 225 63.1
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 1.6e-78 296.6 229 63.3
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 2.8e-78 295.8 225 64.0
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.8e-78 295.8 208 66.8
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.8e-78 295.8 229 61.6
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 3.7e-78 295.4 204 68.1
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 6.3e-78 294.7 229 62.9
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 8.2e-78 294.3 229 62.9
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 8.2e-78 294.3 208 63.9
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.1e-77 293.9 210 63.8
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.8e-77 293.1 221 64.3
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.1e-77 292.4 220 64.5
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.3e-77 291.6 228 61.4
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 6.9e-77 291.2 231 61.5
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 9.0e-77 290.8 219 62.1
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 1.2e-76 290.4 215 64.2
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 1.2e-76 290.4 212 65.1
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.5e-76 290.0 207 64.7
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.5e-76 290.0 211 64.5
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.6e-76 289.3 219 62.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.6e-76 289.3 219 62.1
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 3.4e-76 288.9 222 61.3
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.7e-75 286.6 226 61.1
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 2.9e-75 285.8 226 59.7
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 6.5e-75 284.6 216 63.4
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 6.5e-75 284.6 207 61.8
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 8.5e-75 284.3 217 65.0
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 1.1e-74 283.9 215 63.7
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 4.2e-74 282.0 212 64.2
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 4.2e-74 282.0 216 61.1
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 7.2e-74 281.2 217 63.1
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 7.9e-73 277.7 216 59.3
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 3.0e-72 275.8 207 58.9
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 3.0e-72 275.8 210 63.8
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.0e-72 275.8 216 59.7
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 5.1e-72 275.0 207 58.9
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 5.1e-72 275.0 185 66.5
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 6.7e-72 274.6 207 59.4
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 2.5e-71 272.7 193 64.2
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 2.5e-71 272.7 224 60.3
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 7.4e-71 271.2 221 57.9
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 9.7e-71 270.8 221 57.5
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 2.2e-70 269.6 230 57.8
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 4.8e-70 268.5 217 56.7
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 8.2e-70 267.7 221 57.0
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 1.1e-69 267.3 211 58.3
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 3.1e-69 265.8 208 61.1
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 6.9e-69 264.6 229 58.1
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.5e-68 263.5 215 57.2
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 3.4e-68 262.3 219 56.6
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 4.5e-68 261.9 227 54.6
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 1.3e-67 260.4 213 57.3
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 1.7e-67 260.0 219 56.2
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 1.7e-67 260.0 207 57.0
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 3.8e-67 258.8 175 66.9
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.2e-65 253.8 196 61.7
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.2e-65 253.8 245 55.5
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.6e-65 253.4 170 70.0
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 6.7e-64 248.1 195 61.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 2.0e-63 246.5 210 58.6
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 3.3e-63 245.7 208 57.7
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.1e-61 240.7 219 55.7
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 7.7e-60 234.6 163 68.1
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.1e-58 230.7 196 56.1
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 7.2e-58 228.0 222 52.7
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 9.4e-58 227.6 175 62.9
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 3.6e-57 225.7 163 65.6
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 8.8e-56 221.1 175 55.4
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 2.6e-55 219.5 201 51.2
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.2e-52 210.7 170 57.6
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.7e-52 208.0 177 61.6
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 5.2e-48 195.3 208 46.2
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 2.6e-47 193.0 240 45.0
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 3.1e-45 186.0 188 45.7
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.9e-44 181.8 130 66.9
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.0e-39 166.8 105 73.3
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 2.8e-38 162.9 197 42.6
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.4e-37 158.7 209 39.7
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.7e-28 129.8 159 42.8
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.6e-25 120.6 98 57.1
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.7e-25 119.0 105 55.2
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 1.5e-23 114.0 86 59.3
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 3.5e-20 102.8 88 51.1
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 6.0e-20 102.1 91 45.1
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.5e-10 70.9 90 41.1
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.8e-07 58.9 49 51.0


User provided reference genes

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