Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.2e-95 351.3 169 100.0
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.9e-84 315.8 169 89.3
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 8.8e-77 290.4 169 80.5
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 3.7e-75 285.0 167 78.4
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 2.6e-73 278.9 169 76.9
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 4.7e-70 268.1 165 75.8
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 6.1e-70 267.7 169 74.0
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.1e-68 263.5 165 73.9
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.5e-68 263.1 167 70.7
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.0e-68 262.7 169 71.0
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.6e-68 262.3 169 72.2
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.6e-68 262.3 166 74.1
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 3.3e-68 261.9 163 74.2
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 9.7e-68 260.4 165 72.1
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 73.0
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.3e-67 260.0 167 71.3
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.2e-67 259.2 168 73.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 2.2e-67 259.2 166 71.1
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 2.2e-67 259.2 166 72.9
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.3e-67 257.7 169 72.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.3e-67 257.7 169 72.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.4e-66 256.5 167 68.9
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 9.1e-66 253.8 167 71.9
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.2e-65 253.4 166 70.5
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.5e-65 253.1 168 69.6
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.0e-65 252.7 169 69.2
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 2.6e-65 252.3 166 71.7
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 5.9e-65 251.1 166 71.1
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.7e-65 250.8 169 67.5
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.0e-64 250.4 166 70.5
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.3e-64 250.0 162 69.1
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.7e-64 249.6 168 68.5
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 2.2e-64 249.2 168 69.0
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.2e-64 249.2 168 68.5
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 2.2e-64 249.2 171 68.4
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 2.2e-64 249.2 166 69.9
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.2e-64 249.2 169 66.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.2e-64 249.2 169 66.9
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 5.0e-64 248.1 167 70.1
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 5.0e-64 248.1 169 69.2
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 6.5e-64 247.7 166 68.1
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 8.5e-64 247.3 166 69.3
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 1.4e-63 246.5 161 70.8
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 2.5e-63 245.7 169 67.5
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 2.5e-63 245.7 166 69.3
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 4.2e-63 245.0 168 67.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 4.2e-63 245.0 168 66.1
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 5.5e-63 244.6 168 66.7
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 7.2e-63 244.2 167 68.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 7.2e-63 244.2 166 65.7
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 9.4e-63 243.8 166 68.7
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 9.4e-63 243.8 167 68.9
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 9.4e-63 243.8 167 68.9
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.1e-62 242.7 166 64.5
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 2.7e-62 242.3 164 67.1
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.0e-61 240.4 170 64.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 3.9e-61 238.4 160 68.8
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.2e-61 238.0 166 65.1
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 6.7e-61 237.7 169 66.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.5e-60 236.5 167 67.1
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 2.0e-60 236.1 169 66.9
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.6e-60 235.7 165 65.5
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.3e-60 235.3 165 65.5
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 3.3e-60 235.3 169 65.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 7.4e-60 234.2 166 65.1
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.3e-59 233.4 170 67.6
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.7e-59 233.0 165 67.3
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 2.8e-59 232.3 165 66.7
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.7e-59 231.9 170 65.9
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.7e-59 231.9 168 65.5
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 3.7e-59 231.9 164 62.8
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 8.2e-59 230.7 169 64.5
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.1e-58 230.3 164 64.6
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 4.1e-58 228.4 164 64.0
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 5.3e-58 228.0 169 63.9
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 9.1e-58 227.3 162 64.8
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.2e-57 226.9 164 64.0
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 2.0e-57 226.1 160 65.6
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.6e-57 225.7 165 65.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 3.5e-57 225.3 164 63.4
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.0e-56 223.8 161 64.6
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.2e-56 222.6 167 62.9
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 3.8e-56 221.9 159 63.5
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 6.5e-56 221.1 160 66.9
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 8.8e-53 210.7 143 68.5
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 8.3e-51 204.1 146 65.8
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.4e-50 203.4 166 60.8
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.1e-50 202.2 165 58.8
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.7e-49 199.1 168 59.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 7.7e-49 197.6 140 64.3
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 2.2e-48 196.1 171 59.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 6.5e-48 194.5 140 63.6
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 8.5e-48 194.1 166 57.2
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.2e-47 192.2 166 56.0
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.6e-46 188.7 168 56.0
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 4.0e-45 185.3 161 52.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 8.8e-45 184.1 170 55.9
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.2e-44 183.7 164 50.0
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.2e-44 183.7 133 62.4
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 2.0e-44 183.0 168 53.6
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.4e-44 182.2 129 66.7
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 3.4e-44 182.2 141 60.3
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-42 177.2 174 52.9
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.9e-41 171.4 118 64.4
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.5e-39 166.8 156 53.8
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 5.5e-39 164.9 165 49.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 7.2e-39 164.5 175 49.7
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 7.2e-39 164.5 161 48.4
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.4e-34 149.4 166 41.6
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.0e-33 146.4 143 50.3
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.9e-31 139.8 160 45.6
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.2e-30 137.1 85 74.1
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 6.8e-29 131.3 89 71.9
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 9.8e-28 127.5 167 43.7
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.1e-23 114.0 110 52.7
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 4.3e-23 112.1 131 45.8
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.7e-19 99.0 153 41.2
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 3.1e-13 79.3 44 79.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.6e-12 76.3 62 56.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.3e-08 63.9 121 33.1


User provided reference genes

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