Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 3.7e-67 258.1 130 100.0
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 81.2
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 81.2
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 81.2
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 6.1e-54 214.2 128 80.5
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 81.2
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 3.0e-53 211.8 129 80.6
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 3.0e-53 211.8 128 80.5
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 4.0e-53 211.5 120 82.5
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 6.8e-53 210.7 127 80.3
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.5e-52 209.5 128 78.9
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 1.5e-52 209.5 128 84.4
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.5e-52 209.5 127 79.5
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 80.6
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.4e-52 208.4 127 79.5
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 4.4e-52 208.0 127 80.3
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.4e-52 208.0 130 77.7
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 4.4e-52 208.0 129 79.1
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 5.7e-52 207.6 129 78.3
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 7.5e-52 207.2 128 80.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 7.5e-52 207.2 127 78.7
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 9.8e-52 206.8 130 76.9
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 9.8e-52 206.8 130 76.9
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 77.5
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 1.3e-51 206.5 128 77.3
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 1.7e-51 206.1 127 78.7
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 76.2
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 73.8
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.7e-51 206.1 127 79.5
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.2e-51 205.7 127 78.0
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.8e-51 205.3 127 77.2
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 2.8e-51 205.3 128 76.6
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 3.7e-51 204.9 128 75.8
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 3.7e-51 204.9 127 78.0
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 6.3e-51 204.1 127 79.5
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 6.3e-51 204.1 127 78.7
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.3e-51 204.1 127 77.2
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 6.3e-51 204.1 128 76.6
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 8.3e-51 203.8 132 76.5
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 8.3e-51 203.8 132 75.8
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 8.3e-51 203.8 128 78.1
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 8.3e-51 203.8 127 78.7
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 127 78.7
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 127 78.7
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 1.8e-50 202.6 120 81.7
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 77.3
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 2.4e-50 202.2 127 75.6
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.4e-50 202.2 127 77.2
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 3.1e-50 201.8 127 77.2
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.1e-50 201.4 127 78.0
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 7.0e-50 200.7 131 74.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 9.2e-50 200.3 127 77.2
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.2e-49 199.9 128 75.8
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.2e-49 199.9 127 75.6
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.2e-49 199.9 127 77.2
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.6e-49 199.5 127 76.4
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 2.0e-49 199.1 130 74.6
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.0e-49 199.1 112 83.0
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.7e-49 198.7 120 79.2
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 3.5e-49 198.4 127 78.0
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 3.5e-49 198.4 128 75.8
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 4.5e-49 198.0 127 74.8
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.5e-49 198.0 128 76.6
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 5.9e-49 197.6 127 75.6
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 5.9e-49 197.6 128 73.4
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 5.9e-49 197.6 128 73.4
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 7.8e-49 197.2 132 72.7
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.8e-49 197.2 127 75.6
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.8e-49 197.2 127 73.2
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.0e-48 196.8 128 74.2
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.0e-48 196.8 127 70.9
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.0e-48 196.8 129 77.5
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.3e-48 196.4 128 75.0
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.3e-48 196.4 127 72.4
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 1.3e-48 196.4 127 75.6
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 2.3e-48 195.7 127 73.2
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 2.3e-48 195.7 131 76.3
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 2.9e-48 195.3 127 75.6
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 3.9e-48 194.9 127 74.8
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 5.0e-48 194.5 127 74.8
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 5.0e-48 194.5 128 75.0
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 6.6e-48 194.1 127 72.4
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 6.6e-48 194.1 128 75.0
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 6.6e-48 194.1 128 76.6
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 6.6e-48 194.1 128 78.1
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 8.6e-48 193.7 127 73.2
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 1.1e-47 193.4 116 75.0
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.1e-47 193.4 130 71.5
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 1.5e-47 193.0 130 71.5
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 72.4
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 128 75.0
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 74.0
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 2.5e-47 192.2 127 70.9
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 3.3e-47 191.8 130 71.5
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 3.3e-47 191.8 127 74.8
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 3.3e-47 191.8 142 71.1
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 4.3e-47 191.4 130 70.8
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 4.3e-47 191.4 127 70.9
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.3e-47 191.4 128 74.2
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 5.6e-47 191.0 119 73.9
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 9.5e-47 190.3 127 72.4
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 71.9
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.2e-46 189.9 129 69.8
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.2e-46 189.9 115 76.5
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 72.7
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.2e-46 189.9 120 76.7
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 71.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.6e-46 189.5 130 72.3
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 2.1e-46 189.1 130 71.5
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 129 72.1
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.8e-46 188.7 129 71.3
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 2.8e-46 188.7 116 76.7
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 3.6e-46 188.3 117 75.2
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 3.6e-46 188.3 129 72.1
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 4.7e-46 188.0 128 72.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 4.7e-46 188.0 130 71.5
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 4.7e-46 188.0 130 70.8
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 4.7e-46 188.0 130 70.8
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 4.7e-46 188.0 116 71.6
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 6.1e-46 187.6 129 69.8
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 6.1e-46 187.6 130 70.8
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 6.1e-46 187.6 129 69.8
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 69.8
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 69.8
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 69.8
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 70.5
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 1.0e-45 186.8 128 69.5
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 2.3e-45 185.7 116 79.3
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.1e-45 185.3 129 70.5
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 4.0e-45 184.9 130 72.3
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 4.0e-45 184.9 126 70.6
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 6.8e-45 184.1 129 69.0
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 6.8e-45 184.1 128 68.8
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.2e-44 183.3 120 71.7
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.2e-44 183.3 119 74.8
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 2.9e-43 178.7 114 73.7
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 3.7e-43 178.3 135 70.4
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 4.9e-43 177.9 124 68.5
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 6.4e-43 177.6 116 74.1
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.9e-42 176.0 107 77.6
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 1.2e-41 173.3 119 68.1
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 1.3e-40 169.9 139 66.2
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.3e-40 169.9 128 66.4
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 3.9e-40 168.3 130 60.0
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 8.6e-40 167.2 127 60.6
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 2.5e-39 165.6 128 60.2
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.6e-38 161.8 104 74.0
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 3.1e-37 158.7 91 80.2
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 6.8e-37 157.5 104 72.1
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 2.1e-30 136.0 125 53.6
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.1e-29 132.1 85 76.5
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 4.4e-28 128.3 78 75.6
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 9.2e-26 120.6 73 78.1
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 8.6e-24 114.0 73 72.6
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.6e-22 108.6 70 72.9
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 4.0e-21 105.1 72 69.4
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 8.9e-21 104.0 72 66.7
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 5.8e-20 101.3 73 65.8
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 2.9e-19 99.0 56 83.9
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.9e-18 96.3 60 78.3
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 1.1e-13 80.5 50 72.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 2.4e-10 69.3 95 34.7
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 7.1e-10 67.8 59 55.9
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.9e-08 62.0 43 65.1


User provided reference genes

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