Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 0.0e+00 1369.8 734 100.0
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 2.2e-281 972.2 542 86.2
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 3.1e-272 941.8 521 86.6
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 2.9e-257 892.1 556 77.2
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 1.1e-256 890.2 556 77.5
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 7.8e-255 884.0 556 77.9
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 1.0e-254 883.6 541 78.6
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 1.7e-254 882.9 559 77.6
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.3e-254 882.5 556 77.2
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 2.3e-254 882.5 556 76.6
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 3.9e-254 881.7 556 77.2
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 5.0e-254 881.3 542 79.9
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 8.6e-254 880.6 541 78.4
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 1.9e-253 879.4 537 78.8
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.5e-253 879.0 572 75.3
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 3.3e-253 878.6 556 76.4
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 4.3e-253 878.2 541 78.7
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 5.6e-253 877.9 541 78.2
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 7.3e-253 877.5 556 75.4
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 2.8e-252 875.5 556 76.4
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 1.1e-251 873.6 541 77.8
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 1.4e-251 873.2 541 77.4
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.4e-251 873.2 541 78.4
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.8e-251 872.8 541 78.2
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 2.3e-251 872.5 556 76.6
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 3.1e-251 872.1 556 76.8
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 5.8e-250 867.8 556 75.9
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 9.8e-250 867.1 541 76.7
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 1.3e-249 866.7 556 75.2
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 3.7e-249 865.1 539 77.4
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 6.4e-249 864.4 556 73.9
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 6.4e-249 864.4 555 76.0
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 8.3e-249 864.0 556 73.9
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 1.1e-248 863.6 541 77.4
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 1.9e-248 862.8 539 76.1
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 3.2e-248 862.1 541 77.1
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 2.1e-247 859.4 542 77.3
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 2.7e-247 859.0 564 75.0
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 2.7e-247 859.0 555 75.9
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 4.6e-247 858.2 541 75.2
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 6.0e-247 857.8 554 74.7
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 7.8e-247 857.4 537 76.4
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 1.3e-246 856.7 556 74.8
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 3.0e-246 855.5 556 74.6
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 3.0e-246 855.5 532 78.8
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 6.6e-246 854.4 556 74.5
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 6.6e-246 854.4 556 74.5
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 1.5e-245 853.2 537 75.8
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 2.5e-245 852.4 539 76.8
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 5.6e-245 851.3 541 75.4
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 2.1e-244 849.4 541 75.2
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 8.1e-244 847.4 559 73.5
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 1.4e-243 846.7 525 78.3
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 1.8e-243 846.3 554 73.6
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 8.9e-243 844.0 539 75.9
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 2.0e-242 842.8 541 74.9
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 2.6e-242 842.4 541 76.0
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 4.4e-242 841.6 541 75.8
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 4.4e-242 841.6 542 74.9
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.8e-242 841.3 539 75.9
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 9.9e-242 840.5 556 72.7
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 1.7e-241 839.7 556 73.6
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 3.2e-240 835.5 540 74.6
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 4.1e-240 835.1 541 74.5
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 4.1e-240 835.1 542 74.4
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 9.2e-240 833.9 542 74.9
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 2.1e-239 832.8 556 73.2
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 4.6e-239 831.6 541 74.7
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 1.3e-238 830.1 541 73.8
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 2.3e-238 829.3 559 72.8
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 5.1e-238 828.2 557 72.7
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 5.1e-238 828.2 555 71.9
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 8.6e-238 827.4 541 73.4
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 1.1e-237 827.0 541 73.4
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 1.5e-237 826.6 555 74.1
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 1.5e-237 826.6 512 77.5
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 2.5e-237 825.9 548 73.7
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 2.1e-236 822.8 556 71.4
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 6.2e-236 821.2 542 74.0
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 1.1e-235 820.5 541 72.6
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 1.8e-235 819.7 557 70.9
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 8.9e-235 817.4 556 71.2
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.5e-234 816.6 568 71.0
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 2.6e-234 815.8 542 73.6
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 7.6e-234 814.3 544 73.0
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 1.7e-233 813.1 556 71.2
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 6.4e-233 811.2 541 72.8
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.9e-232 809.7 541 72.5
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.9e-232 809.7 541 72.5
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.9e-232 809.7 541 72.5
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 4.6e-231 805.1 547 71.8
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 6.0e-231 804.7 558 71.1
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 1.7e-230 803.1 541 71.5
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 2.3e-230 802.7 557 70.7
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 3.0e-230 802.4 547 71.7
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 3.9e-230 802.0 541 71.5
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 6.6e-230 801.2 574 69.0
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 8.7e-230 800.8 541 71.7
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 9.6e-229 797.3 538 70.8
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 3.6e-228 795.4 554 70.8
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 4.0e-227 792.0 537 72.6
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 1.1e-224 783.9 547 70.9
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 4.2e-224 781.9 599 65.4
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 1.0e-222 777.3 524 73.1
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 3.0e-222 775.8 559 70.7
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 3.3e-221 772.3 553 68.5
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 1.4e-219 766.9 547 69.8
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 9.0e-219 764.2 584 66.6
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 3.9e-214 748.8 530 67.7
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 1.1e-213 747.3 559 64.9
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.5e-213 746.9 559 67.6
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 2.5e-213 746.1 541 68.8
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 2.5e-213 746.1 527 71.7
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 1.2e-210 737.3 472 74.4
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 7.6e-210 734.6 472 74.2
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 6.0e-207 724.9 542 63.7
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.0e-206 724.2 527 70.0
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 1.0e-206 724.2 448 77.2
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 7.4e-205 718.0 535 63.2
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 6.5e-193 678.3 562 62.8
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 2.1e-183 646.7 530 60.0
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.3e-182 643.3 434 72.8
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.5e-181 640.6 546 55.5
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 7.4e-181 638.3 392 78.1
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 1.6e-175 620.5 392 76.0
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 1.6e-170 604.0 534 58.6
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 4.0e-166 589.3 392 72.7
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 5.2e-166 589.0 542 55.5
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.3e-158 563.5 482 55.2
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 8.3e-156 555.1 323 81.4
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 1.9e-144 517.3 309 83.2
FAN04G1176 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.0e-129 468.4 320 70.0
Hma1.2p1_1281F.1_g272610 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 3.9e-129 466.5 288 75.7
CARHR293240 Cardamine hirsuta HOM05D001656 ORTHO05D005043 2.9e-124 450.3 304 69.4
unitig_736.g22951 Utricularia gibba HOM05D001656 ORTHO05D005043 3.2e-123 446.8 301 70.1
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 1.6e-119 434.5 293 71.0
Oeu035949.1 Olea europaea HOM05D001656 ORTHO05D005043 4.4e-109 399.8 266 71.4
Oeu011631.2 Olea europaea HOM05D001656 ORTHO05D005043 8.7e-105 385.6 239 81.6
HPP92_028451 Vanilla planifolia HOM05D001656 ORTHO05D005043 5.6e-104 382.9 271 66.4
SpUn0078_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 3.2e-99 367.1 246 73.6
HPP92_019867 Vanilla planifolia HOM05D001656 ORTHO05D005043 1.1e-94 352.1 236 74.6
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 1.6e-87 328.2 240 67.5
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 4.3e-80 303.5 267 59.2
unitig_736.g22950 Utricularia gibba HOM05D001656 ORTHO05D005043 3.1e-54 217.6 142 74.6
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.7e-52 211.8 137 74.5
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 2.2e-52 211.5 139 73.4
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 2.9e-52 211.1 138 73.9
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 3.8e-52 210.7 139 73.4
Atru.chr7.541 Acer truncatum HOM05D001656 ORTHO05D005043 1.1e-51 209.1 193 56.5
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 6.3e-47 193.4 128 73.4
Dinv26408 Davidia involucrata HOM05D001656 ORTHO05D005043 1.6e-37 162.2 98 78.6
Dinv14696 Davidia involucrata HOM05D001656 ORTHO05D005043 1.9e-35 155.2 116 66.4
Atru.chr13.2595 Acer truncatum HOM05D001656 ORTHO05D005043 4.3e-27 127.5 116 56.0
HanXRQChr08g0210401 Helianthus annuus HOM05D001656 ORTHO05D005043 8.9e-25 119.8 56 92.9
Cc01_g04230 Coffea canephora HOM05D001656 ORTHO05D005043 1.1e-22 112.8 63 79.4
Cc04_g15120 Coffea canephora HOM05D001656 ORTHO05D005043 1.9e-22 112.1 63 77.8
Cc02_g27750 Coffea canephora HOM05D001656 ORTHO05D005043 7.0e-22 110.2 63 76.2
Cc11_g07750 Coffea canephora HOM05D001656 ORTHO05D005043 7.0e-22 110.2 71 69.0
ECA247G1681 Erigeron canadensis HOM05D000257 ORTHO05D008527 1.7e-20 105.5 64 76.6
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 3.3e-19 101.3 63 76.2
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.6e-18 99.0 63 74.6
Cre07.g321100 Chlamydomonas reinhardtii HOM05D001656 ORTHO05D014814 9.8e-16 89.7 493 24.1
Cc08_g09760 Coffea canephora HOM05D001656 ORTHO05D005043 3.7e-15 87.8 54 74.1
CBR_g50937 Chara braunii HOM05D001656 ORTHO05D005043 4.1e-14 84.3 228 27.6
MCO10G102 Micromonas commoda HOM05D001656 ORTHO05D014814 3.5e-13 81.3 434 23.7
RcHm_v2.0_Chr2g0168121 Rosa chinensis HOM05D004344 ORTHO05D021344 3.3e-11 74.7 54 61.1
PRCOL_00006907 Prasinoderma coloniale HOM05D013921 ORTHO05D014814 4.4e-08 64.3 518 21.4
FvH4_5g33600 Fragaria vesca HOM05D001656 ORTHO05D005043 3.8e-07 61.2 49 59.2
FAN18G3130 Fragaria x ananassa HOM05D001656 ORTHO05D005043 3.8e-07 61.2 49 59.2
ECA247G1273 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-06 59.7 45 57.8
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 1.9e-06 58.9 119 26.9
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-06 58.5 120 30.0
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.2e-06 58.2 120 30.0
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 7.1e-06 57.0 61 45.9


User provided reference genes

Program Settings