Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 0.0e+00 1765.4 864 100.0
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 0.0e+00 1470.7 868 84.7
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1455.7 868 84.0
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1447.6 869 83.0
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 0.0e+00 1246.1 869 73.6
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1244.6 864 74.1
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1243.4 862 73.7
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 0.0e+00 1228.0 864 72.8
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 0.0e+00 1212.2 864 72.3
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1201.0 862 71.9
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 0.0e+00 1199.9 866 71.8
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1197.2 862 71.7
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 0.0e+00 1191.8 864 71.1
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 0.0e+00 1189.1 861 70.7
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1189.1 865 70.3
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 0.0e+00 1187.2 898 68.4
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 0.0e+00 1184.1 874 70.0
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 0.0e+00 1178.3 861 71.1
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 0.0e+00 1178.3 868 70.3
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1177.5 861 71.1
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 0.0e+00 1176.4 845 71.2
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 0.0e+00 1174.8 898 67.9
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 0.0e+00 1171.8 868 70.6
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1170.6 887 68.9
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1169.8 872 69.0
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 0.0e+00 1169.5 865 70.1
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1164.1 867 70.0
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 0.0e+00 1164.1 900 67.8
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1161.7 864 69.8
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 0.0e+00 1161.4 900 67.6
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 0.0e+00 1159.4 885 69.2
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1158.7 864 69.9
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 0.0e+00 1156.7 909 66.6
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 0.0e+00 1156.4 866 70.0
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1155.6 864 69.8
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1155.6 877 67.5
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1153.3 871 67.9
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 0.0e+00 1152.9 883 67.6
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1152.5 893 67.6
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1152.5 892 67.8
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1150.6 891 67.6
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 0.0e+00 1149.4 865 68.8
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1148.3 876 68.4
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1147.5 876 67.7
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1147.1 834 70.3
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1145.2 901 66.6
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 0.0e+00 1143.6 898 66.5
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1140.2 865 69.6
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1139.4 875 67.1
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1139.4 868 68.7
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 0.0e+00 1138.3 870 68.9
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1137.5 867 68.1
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1137.1 908 65.7
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1136.3 856 66.9
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1135.9 874 67.3
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1134.8 866 67.3
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1133.2 864 68.4
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1132.9 892 66.1
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 0.0e+00 1132.1 878 66.3
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 0.0e+00 1131.3 891 66.1
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1128.2 863 67.9
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1124.8 891 65.8
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1122.1 865 67.4
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1121.7 915 64.7
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1121.3 898 65.4
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 0.0e+00 1120.1 867 67.4
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 0.0e+00 1119.4 865 68.1
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1118.6 866 67.1
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1117.4 865 66.9
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1116.7 915 64.2
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1115.1 880 66.7
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 0.0e+00 1112.8 896 65.0
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 0.0e+00 1112.4 868 67.4
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1110.1 864 66.6
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 0.0e+00 1104.4 864 67.1
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1103.6 867 67.1
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1098.6 891 64.3
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 0.0e+00 1095.5 870 65.9
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1092.8 882 65.9
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 0.0e+00 1090.9 895 64.7
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1090.1 865 66.5
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 0.0e+00 1089.7 867 67.0
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 0.0e+00 1088.2 861 65.6
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1086.6 868 65.3
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1085.1 878 64.8
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1083.6 885 64.4
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 0.0e+00 1076.6 800 67.9
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1075.8 864 64.6
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1075.1 864 64.8
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 2.4e-311 1072.0 875 63.0
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 7.6e-310 1067.0 870 63.4
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 9.9e-310 1066.6 884 63.7
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 2.9e-309 1065.1 878 62.9
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 6.5e-309 1063.9 885 62.6
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 7.1e-308 1060.4 867 65.5
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 3.9e-306 1054.7 837 66.7
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 6.7e-306 1053.9 889 64.2
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 6.7e-306 1053.9 877 62.8
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.5e-305 1052.7 865 65.3
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 7.4e-305 1050.4 864 64.1
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 3.1e-303 1045.0 750 70.5
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 4.1e-303 1044.6 876 63.0
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 9.0e-303 1043.5 875 64.3
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 3.4e-302 1041.6 881 63.9
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 7.6e-302 1040.4 866 64.1
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 1.0e-301 1040.0 883 63.5
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 5.0e-301 1037.7 877 64.2
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 5.5e-300 1034.2 877 64.1
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 1.2e-299 1033.1 887 63.8
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 1.2e-299 1033.1 875 64.1
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 2.1e-299 1032.3 882 63.5
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.3e-298 1029.6 867 63.8
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 3.0e-298 1028.5 883 63.8
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 4.3e-297 1024.6 880 62.6
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 9.7e-297 1023.5 869 63.3
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 9.0e-295 1016.9 818 66.4
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 1.2e-291 1006.5 838 64.9
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 6.1e-291 1004.2 946 58.5
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 7.9e-291 1003.8 867 61.8
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 3.8e-285 984.9 867 61.4
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 9.4e-284 980.3 824 64.2
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 2.7e-283 978.8 790 65.7
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 2.6e-281 972.2 829 62.1
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 3.8e-277 958.4 641 75.0
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 1.2e-275 953.4 955 56.0
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 5.2e-274 948.0 901 58.2
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 5.7e-273 944.5 881 60.0
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 1.0e-269 933.7 588 77.6
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 1.7e-269 932.9 878 57.7
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.9e-268 929.5 901 57.8
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 8.0e-267 924.1 901 57.4
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 5.9e-262 907.9 832 57.5
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 3.7e-248 862.1 844 54.9
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.4e-247 860.1 858 54.4
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.5e-244 850.1 825 56.4
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 2.1e-243 846.3 886 52.4
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 4.4e-241 838.6 907 53.8
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 6.0e-238 828.2 845 53.4
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 1.9e-236 823.2 819 54.8
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 2.6e-233 812.8 809 55.5
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.2e-227 793.9 617 64.5
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 4.3e-212 742.3 572 62.9
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 9.9e-209 731.1 829 46.9
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.5e-204 717.2 861 45.9
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 1.8e-202 710.3 569 66.8
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 5.8e-201 705.3 864 44.6
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 1.2e-190 671.0 613 53.8
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 1.1e-183 647.9 619 57.5
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 4.3e-180 636.0 619 57.0
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 6.3e-171 605.5 879 42.7
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 3.1e-162 576.6 559 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 1.4e-141 508.1 568 47.4
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 2.7e-137 493.8 514 54.9
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 5.2e-133 479.6 430 60.5
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 8.3e-115 419.1 607 38.4
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.3e-112 411.8 478 48.7
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.2e-110 405.2 505 46.7
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 8.4e-107 392.5 401 56.6
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 4.3e-95 353.6 698 33.2
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 1.5e-92 345.1 264 64.4
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 7.6e-84 316.2 222 68.0
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 4.8e-78 297.0 264 58.7
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 2.9e-67 261.2 521 30.9
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 5.0e-67 260.4 175 70.3
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 6.3e-62 243.4 504 30.8
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.0e-59 236.1 156 73.1
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 1.8e-32 145.6 180 48.3
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 5.9e-28 130.6 211 43.1
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 5.4e-21 107.5 74 73.0
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 2.7e-20 105.1 78 65.4
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 7.8e-20 103.6 70 70.0
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.6e-17 95.9 118 48.3
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 1.7e-11 75.9 78 52.6


User provided reference genes

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