Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 0.0e+00 1515.7 783 100.0
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 5.8e-309 1063.9 798 73.1
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 5.9e-285 984.2 805 69.7
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 3.5e-237 825.5 825 58.7
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 1.2e-234 817.0 826 56.7
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 9.9e-232 807.4 840 54.9
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 3.8e-231 805.4 801 58.8
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 1.4e-230 803.5 826 55.6
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 1.4e-230 803.5 835 56.2
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.9e-230 803.1 799 58.7
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 2.1e-229 799.7 812 57.3
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 4.6e-229 798.5 817 56.2
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 1.0e-228 797.3 827 55.6
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 8.9e-225 784.3 808 56.6
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 8.9e-225 784.3 883 52.9
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.6e-224 782.7 806 54.5
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 2.9e-223 779.2 812 55.4
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 6.4e-223 778.1 883 52.5
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.2e-222 775.8 808 56.1
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 4.2e-222 775.4 811 56.1
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 1.6e-221 773.5 822 54.3
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 1.6e-221 773.5 817 55.1
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 7.8e-221 771.2 806 55.8
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 2.1e-218 763.1 819 54.9
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 2.1e-218 763.1 805 54.8
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 6.2e-218 761.5 823 55.0
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 3.1e-217 759.2 814 56.0
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 1.5e-216 756.9 778 56.3
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 9.9e-216 754.2 802 54.9
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 1.4e-214 750.4 800 55.0
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 1.9e-214 750.0 815 54.7
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 5.4e-214 748.4 834 52.4
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 3.5e-213 745.7 829 54.4
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 3.9e-212 742.3 817 55.7
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 4.3e-211 738.8 820 52.7
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 2.8e-210 736.1 837 52.7
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 2.8e-210 736.1 812 54.9
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 2.8e-210 736.1 819 54.1
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 4.5e-208 728.8 813 54.7
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 9.9e-208 727.6 821 53.0
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 2.2e-207 726.5 814 54.7
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 6.4e-207 724.9 788 54.6
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.9e-206 723.4 856 52.7
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 3.2e-206 722.6 813 53.1
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 4.2e-206 722.2 792 54.0
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 2.1e-205 719.9 854 52.3
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 1.0e-204 717.6 833 52.0
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 3.9e-204 715.7 785 53.6
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 3.9e-204 715.7 790 55.4
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 3.3e-203 712.6 810 51.4
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 4.3e-203 712.2 823 51.6
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 7.4e-203 711.4 796 52.9
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.1e-201 707.6 802 52.0
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 2.0e-200 703.4 801 52.6
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 5.5e-198 695.3 825 51.9
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 1.2e-197 694.1 811 52.5
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 1.6e-197 693.7 805 50.9
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 1.5e-195 687.2 814 51.0
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 5.7e-195 685.3 808 50.1
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 9.6e-195 684.5 803 50.4
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 9.6e-195 684.5 821 49.9
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 1.3e-194 684.1 826 49.9
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 2.1e-194 683.3 809 52.0
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 2.8e-194 682.9 794 51.8
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 4.8e-194 682.2 798 50.9
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 6.3e-194 681.8 815 52.3
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 2.4e-193 679.9 817 49.7
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 2.0e-192 676.8 625 60.2
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 1.1e-190 671.0 753 52.9
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 7.2e-190 668.3 811 50.2
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 7.2e-190 668.3 774 51.9
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 9.3e-190 667.9 818 49.5
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.6e-189 667.2 802 51.7
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 4.6e-189 665.6 804 51.1
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 2.5e-187 659.8 788 50.1
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 7.4e-187 658.3 801 50.8
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 6.3e-186 655.2 811 49.4
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 8.2e-186 654.8 812 50.5
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 4.1e-185 652.5 811 49.3
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 5.3e-185 652.1 777 51.9
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 5.3e-185 652.1 807 49.2
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 5.3e-185 652.1 797 50.6
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 2.6e-184 649.8 789 50.7
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 2.6e-184 649.8 648 57.3
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 5.9e-184 648.7 790 50.6
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.3e-183 647.5 614 56.8
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 2.9e-183 646.4 793 49.7
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 8.5e-183 644.8 789 50.7
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 1.1e-182 644.4 793 50.3
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 1.2e-181 641.0 793 49.7
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 1.8e-180 637.1 760 51.6
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 8.8e-180 634.8 790 50.3
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 1.1e-179 634.4 799 50.2
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 4.4e-179 632.5 789 49.9
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 3.7e-178 629.4 788 50.1
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 1.4e-177 627.5 792 49.0
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 1.4e-177 627.5 789 50.1
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 1.0e-175 621.3 724 52.5
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 5.0e-175 619.0 870 46.8
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 6.5e-175 618.6 791 49.2
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 3.2e-174 616.3 790 47.5
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 7.2e-174 615.1 813 48.7
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 1.1e-171 607.8 778 49.1
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 1.1e-171 607.8 772 50.3
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 1.8e-169 600.5 788 48.9
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 3.1e-169 599.7 643 54.0
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 9.1e-169 598.2 433 69.5
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 1.1e-166 591.3 783 48.3
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 2.6e-163 580.1 625 51.7
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 3.5e-160 569.7 747 48.3
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 8.5e-159 565.1 626 53.4
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 2.3e-156 557.0 853 43.0
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 9.1e-153 545.0 861 42.7
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 1.1e-150 538.1 852 43.7
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 7.2e-150 535.4 783 45.7
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 1.5e-147 527.7 792 43.3
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 1.5e-139 501.1 800 42.6
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 1.2e-133 481.5 475 56.0
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 1.1e-132 478.4 798 41.0
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 4.1e-129 466.5 520 51.9
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 1.3e-114 418.3 743 40.8
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.9e-103 380.2 553 42.5
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 9.9e-91 339.0 716 35.9
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 5.6e-86 323.2 308 57.8
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 7.4e-86 322.8 537 38.7
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.1e-85 321.2 485 41.0
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 2.8e-85 320.9 702 34.9
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.5e-83 313.5 510 39.8
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.7e-82 311.6 433 42.0
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.5e-81 307.8 486 39.3
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.5e-81 307.8 486 39.3
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.1e-78 298.9 483 38.9
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 7.9e-72 276.2 472 36.9
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 1.9e-70 271.6 535 37.0
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.1e-68 265.8 553 40.0
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 1.4e-60 238.8 380 42.6
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 5.2e-55 220.3 196 52.0
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 5.3e-52 210.3 666 33.6
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 1.5e-46 192.2 201 58.2
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 2.3e-39 168.3 425 37.4
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 7.0e-36 156.8 365 35.3
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 8.6e-26 123.2 92 58.7
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 5.6e-17 94.0 71 69.0
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 4.0e-15 87.8 81 51.9
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.1e-12 79.7 54 63.0
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 1.3e-10 72.8 53 60.4
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 2.3e-10 72.0 74 48.6
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 2.3e-10 72.0 74 48.6
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 6.6e-10 70.5 53 54.7
unitig_26.g8886 Utricularia gibba HOM05D004705 ORTHO05D005595 1.1e-07 63.2 75 46.7
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.1e-07 61.6 53 49.1
Cre17.g717400 Chlamydomonas reinhardtii HOM05D004705 ORTHO05D005595 5.8e-06 57.4 75 44.0


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