Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 8.2e-117 423.7 210 100.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 2.7e-51 206.1 197 61.9
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.8e-42 176.8 211 52.6
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 5.0e-21 105.5 182 42.9
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.9e-20 103.6 178 42.7
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 7.2e-20 101.7 176 42.0
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 3.6e-19 99.4 209 39.7
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 2.3e-18 96.7 168 41.1
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.1e-18 95.5 175 41.7
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 6.7e-18 95.1 174 43.1
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 8.8e-18 94.7 173 41.6
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 2.0e-17 93.6 168 41.1
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.0e-17 93.6 165 41.2
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 4.3e-17 92.4 181 38.1
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 4.3e-17 92.4 165 41.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 9.7e-17 91.3 178 40.4
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.3e-16 90.9 184 38.0
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.7e-16 90.5 173 40.5
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.2e-16 90.1 172 39.0
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.8e-16 89.7 175 38.3
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.8e-16 89.0 178 40.4
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 4.8e-16 89.0 180 41.1
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 4.8e-16 89.0 175 40.6
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 6.3e-16 88.6 178 37.6
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 6.3e-16 88.6 171 40.4
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 6.3e-16 88.6 180 40.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 6.3e-16 88.6 176 39.8
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.2e-16 88.2 184 38.0
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.2e-16 88.2 184 38.0
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.1e-15 87.8 174 37.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.4e-15 87.4 179 38.5
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.8e-15 87.0 179 38.5
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.8e-15 87.0 179 38.0
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.8e-15 87.0 171 40.4
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.8e-15 87.0 183 36.1
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.4e-15 86.7 175 39.4
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 3.1e-15 86.3 178 41.6
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 3.1e-15 86.3 182 39.6
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 4.1e-15 85.9 178 41.0
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 4.1e-15 85.9 175 38.3
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 6.9e-15 85.1 162 41.4
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 6.9e-15 85.1 164 37.2
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 9.1e-15 84.7 173 38.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.2e-14 84.3 172 40.7
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.5e-14 84.0 158 41.8
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.5e-14 84.0 176 37.5
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.5e-14 84.0 174 37.9
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-14 83.6 171 38.0
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 2.0e-14 83.6 175 38.9
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 2.0e-14 83.6 175 38.9
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.0e-14 83.6 177 37.9
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.0e-14 83.6 188 38.3
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.0e-14 83.6 164 36.6
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.0e-14 83.6 179 38.5
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 2.6e-14 83.2 160 38.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.6e-14 83.2 177 39.5
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 3.4e-14 82.8 175 38.9
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 3.4e-14 82.8 175 38.3
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.4e-14 82.8 187 38.5
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.4e-14 82.8 187 38.5
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 3.4e-14 82.8 172 37.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 4.5e-14 82.4 178 37.1
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 4.5e-14 82.4 193 35.8
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.7e-14 81.6 188 35.1
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 7.7e-14 81.6 161 40.4
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.0e-13 81.3 162 38.3
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.0e-13 81.3 173 38.2
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.0e-13 81.3 171 36.8
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.3e-13 80.9 178 38.2
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.7e-13 80.5 175 36.6
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 2.9e-13 79.7 171 39.2
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 3.8e-13 79.3 181 32.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 3.8e-13 79.3 177 35.6
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 5.0e-13 79.0 177 40.1
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 6.5e-13 78.6 175 36.6
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 6.5e-13 78.6 171 36.8
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 6.5e-13 78.6 179 36.9
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.4e-12 77.4 65 63.1
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 2.5e-12 76.6 172 32.0
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.2e-12 76.3 171 37.4
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 4.2e-12 75.9 168 38.7
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 5.5e-12 75.5 171 36.8
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 5.5e-12 75.5 172 39.5
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 5.5e-12 75.5 179 34.6
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.2e-12 75.1 195 32.3
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 9.4e-12 74.7 171 35.7
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 9.4e-12 74.7 171 35.7
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.2e-11 74.3 171 35.7
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.2e-11 74.3 171 35.7
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.2e-11 74.3 185 36.2
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.6e-11 73.9 172 35.5
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 2.1e-11 73.6 171 33.9
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 2.1e-11 73.6 175 34.9
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.8e-10 70.5 172 36.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-10 70.5 190 35.3
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 2.3e-10 70.1 130 37.7
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 3.0e-10 69.7 177 36.2
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 5.1e-10 68.9 184 34.2
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 6.7e-10 68.6 78 51.3
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.6e-09 66.6 170 35.3
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 3.3e-09 66.2 160 34.4
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 9.7e-09 64.7 176 33.0
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.7e-08 63.9 195 34.4
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 2.8e-08 63.2 40 70.0
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.8e-08 62.4 161 31.7
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.8e-07 60.5 79 44.3
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.4e-07 60.1 171 33.9
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.4e-07 60.1 189 31.7
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 4.1e-07 59.3 69 46.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 4.1e-07 59.3 156 30.1
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 4.1e-07 59.3 42 69.0
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 4.1e-07 59.3 177 32.8
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 5.3e-07 58.9 179 34.1
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 7.0e-07 58.5 46 60.9
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 7.0e-07 58.5 38 68.4
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 9.1e-07 58.2 42 66.7
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 4.5e-06 55.8 160 32.5
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 5.9e-06 55.5 172 34.9
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 7.7e-06 55.1 61 52.5


User provided reference genes

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