Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 5.5e-72 274.2 143 100.0
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 8.3e-44 180.6 135 74.1
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 7.0e-43 177.6 129 72.9
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 1.0e-33 147.1 134 62.7
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 2.8e-31 139.0 139 53.2
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 2.8e-31 139.0 141 58.9
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 6.1e-31 137.9 140 59.3
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 8.0e-31 137.5 141 58.2
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 1.0e-30 137.1 150 54.7
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 1.0e-30 137.1 140 57.9
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 2.6e-29 132.5 141 58.9
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 4.4e-29 131.7 137 53.3
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 7.5e-29 131.0 146 52.1
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 1.3e-28 130.2 152 50.0
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 1.7e-28 129.8 149 51.0
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 2.9e-28 129.0 130 56.9
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 3.7e-28 128.6 141 56.7
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 4.9e-28 128.3 143 55.9
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 1.8e-27 126.3 142 54.2
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 4.1e-27 125.2 144 54.2
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 5.4e-27 124.8 139 53.2
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 7.0e-27 124.4 140 54.3
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 1.2e-26 123.6 141 53.9
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 1.6e-26 123.2 142 51.4
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 2.0e-26 122.9 143 53.8
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 2.7e-26 122.5 139 53.2
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 4.6e-26 121.7 125 55.2
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 4.6e-26 121.7 140 54.3
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 7.8e-26 120.9 138 52.2
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 7.8e-26 120.9 145 51.0
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 7.8e-26 120.9 139 50.4
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.7e-25 119.8 139 50.4
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 2.3e-25 119.4 139 53.2
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 2.3e-25 119.4 142 52.1
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 2.3e-25 119.4 140 52.1
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 3.0e-25 119.0 139 49.6
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 3.9e-25 118.6 143 55.9
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 3.9e-25 118.6 139 51.1
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 5.0e-25 118.2 134 50.0
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 6.6e-25 117.9 140 48.6
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 8.6e-25 117.5 145 49.7
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.5e-24 116.7 150 50.7
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 1.5e-24 116.7 150 50.7
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 1.5e-24 116.7 141 53.2
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.9e-24 116.3 150 50.7
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 1.9e-24 116.3 145 49.7
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 2.5e-24 115.9 145 51.0
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 3.3e-24 115.5 139 48.9
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 4.3e-24 115.2 131 51.1
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 4.3e-24 115.2 149 51.0
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 4.3e-24 115.2 143 49.7
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 5.6e-24 114.8 143 49.0
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 5.6e-24 114.8 137 50.4
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 5.6e-24 114.8 138 55.1
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 9.5e-24 114.0 146 51.4
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.2e-23 113.6 139 50.4
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 2.1e-23 112.8 129 48.8
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 6.2e-23 111.3 143 51.0
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 1.1e-22 110.5 140 54.3
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 1.4e-22 110.2 133 54.9
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.3e-22 109.4 138 49.3
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 4.0e-22 108.6 137 50.4
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 5.2e-22 108.2 138 49.3
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 8.9e-22 107.5 109 54.1
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.2e-21 107.1 139 46.8
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 1.5e-21 106.7 141 46.1
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 2.0e-21 106.3 166 44.6
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 3.4e-21 105.5 139 50.4
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 3.4e-21 105.5 101 59.4
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 5.8e-21 104.8 109 56.9
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 5.8e-21 104.8 134 51.5
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 5.8e-21 104.8 142 47.2
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 7.5e-21 104.4 140 50.7
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 2.2e-20 102.8 140 50.0
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 3.7e-20 102.1 134 47.0
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 1.1e-19 100.5 139 48.9
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 1.9e-19 99.8 149 47.7
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 2.4e-19 99.4 119 49.6
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 3.2e-19 99.0 144 47.2
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 3.2e-19 99.0 144 47.2
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 4.1e-19 98.6 126 44.4
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 9.2e-19 97.4 145 47.6
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 1.2e-18 97.1 128 50.0
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 2.1e-18 96.3 81 61.7
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 6.0e-18 94.7 124 50.0
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 1.7e-17 93.2 122 46.7
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 5.0e-17 91.7 143 43.4
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 5.0e-17 91.7 122 45.9
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 6.6e-17 91.3 124 44.4
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 1.5e-16 90.1 147 42.2
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 1.5e-16 90.1 135 40.7
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 4.3e-16 88.6 128 43.8
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 4.3e-16 88.6 125 44.8
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 5.6e-16 88.2 144 42.4
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 5.6e-16 88.2 149 41.6
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 1.2e-15 87.0 145 42.1
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 2.1e-15 86.3 151 41.1
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 2.8e-15 85.9 125 44.0
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 4.7e-15 85.1 134 44.0
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 6.2e-15 84.7 133 39.1
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 8.1e-15 84.3 79 58.2
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 8.9e-14 80.9 128 37.5
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 5.8e-13 78.2 128 36.7
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 2.9e-12 75.9 132 39.4
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 1.1e-11 73.9 149 38.9
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 9.2e-11 70.9 163 35.0
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 1.1e-08 63.9 143 37.1
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 7.3e-08 61.2 66 48.5
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 9.5e-08 60.8 96 42.7
BcaC06g32867 Brassica carinata HOM05D007505 ORTHO05D009476 2.4e-06 56.2 118 36.4
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 4.0e-06 55.5 97 34.0


User provided reference genes

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