Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.0e-124 449.1 225 100.0
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.9e-90 336.3 223 75.8
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 3.6e-86 322.0 256 69.5
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.9e-80 302.0 228 68.0
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 3.3e-79 298.9 210 71.0
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 2.1e-78 296.2 221 67.9
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 3.6e-78 295.4 184 75.0
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.4e-77 293.5 184 76.1
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 6.8e-77 291.2 226 65.9
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.2e-76 290.4 176 77.3
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 2.0e-76 289.7 238 65.1
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 9.9e-76 287.3 193 69.9
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 9.9e-76 287.3 180 77.2
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.7e-75 286.6 178 77.5
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 2.2e-75 286.2 184 75.0
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 2.2e-75 286.2 178 75.8
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.9e-75 285.8 192 72.9
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.7e-75 285.4 187 73.8
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 4.9e-75 285.0 192 71.9
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.9e-74 283.1 179 74.9
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 5.4e-74 281.6 167 79.6
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 7.1e-74 281.2 181 75.1
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.2e-73 280.4 167 79.0
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.6e-73 280.0 180 72.8
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.6e-73 280.0 183 74.9
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.7e-73 279.3 196 68.4
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 2.7e-73 279.3 180 75.6
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 4.6e-73 278.5 203 68.5
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 7.8e-73 277.7 177 75.7
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.3e-72 276.9 196 70.4
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 1.3e-72 276.9 177 75.7
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.3e-72 276.9 184 71.7
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.7e-72 276.6 171 77.8
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.0e-72 275.8 211 64.0
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 8.6e-72 274.2 178 73.0
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 4.3e-71 271.9 187 72.7
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.6e-71 271.6 211 63.0
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.2e-70 270.4 212 63.7
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 2.1e-70 269.6 227 60.4
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 3.6e-70 268.9 216 61.6
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 8.1e-70 267.7 187 71.1
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 8.1e-70 267.7 176 72.7
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.4e-69 266.9 186 66.7
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 4.0e-69 265.4 186 66.7
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 6.8e-69 264.6 180 67.8
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 6.8e-69 264.6 167 74.9
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 8.9e-69 264.2 176 71.6
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 8.9e-69 264.2 214 60.7
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 8.9e-69 264.2 177 72.3
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.0e-68 263.1 194 63.4
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.6e-68 262.7 185 65.9
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.6e-68 262.7 201 64.2
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 4.4e-68 261.9 197 63.5
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 7.6e-68 261.2 228 56.1
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.9e-67 259.2 178 66.9
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 4.9e-67 258.5 162 74.1
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 8.4e-67 257.7 178 67.4
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 8.4e-67 257.7 185 70.8
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 1.1e-66 257.3 186 69.9
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.1e-66 257.3 187 64.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.1e-66 257.3 187 64.7
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.1e-66 257.3 192 63.0
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-66 256.1 178 66.3
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 4.2e-66 255.4 168 69.6
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 4.2e-66 255.4 178 66.3
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 4.2e-66 255.4 169 73.4
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 4.2e-66 255.4 187 68.4
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 5.4e-66 255.0 184 66.3
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 5.4e-66 255.0 179 70.9
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 5.4e-66 255.0 173 71.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 7.1e-66 254.6 178 66.3
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 7.1e-66 254.6 178 66.3
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 9.3e-66 254.2 187 65.2
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 9.3e-66 254.2 168 69.0
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 9.3e-66 254.2 177 71.8
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.6e-65 253.4 167 70.7
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 2.1e-65 253.1 187 62.0
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 2.1e-65 253.1 195 64.6
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.7e-65 252.7 168 69.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 3.5e-65 252.3 187 64.2
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 4.6e-65 251.9 179 70.4
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 6.0e-65 251.5 177 68.4
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 6.0e-65 251.5 181 69.6
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 1.0e-64 250.8 179 69.8
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.3e-64 250.4 185 65.9
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.7e-64 250.0 198 62.1
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 2.3e-64 249.6 178 65.7
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 3.9e-64 248.8 187 62.0
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 3.9e-64 248.8 187 62.0
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 5.1e-64 248.4 195 60.5
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.9e-63 246.5 186 62.4
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.5e-63 246.1 168 67.9
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 3.3e-63 245.7 178 64.6
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.3e-63 245.7 185 64.3
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 3.3e-63 245.7 188 63.8
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.4e-61 240.4 167 67.1
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-60 236.1 174 64.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 7.6e-60 234.6 204 61.3
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 9.9e-60 234.2 185 60.5
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.3e-59 233.8 154 73.4
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 3.8e-59 232.3 175 62.3
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 4.9e-59 231.9 173 63.6
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 4.9e-59 231.9 175 61.7
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 2.1e-57 226.5 188 59.0
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 5.1e-56 221.9 144 74.3
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.9e-55 219.9 147 72.1
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 4.3e-55 218.8 200 59.0
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 8.1e-54 214.5 188 60.6
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 2.6e-52 209.5 130 77.7
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 3.8e-51 205.7 168 58.3
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 9.3e-50 201.1 134 70.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 2.5e-47 193.0 160 57.5
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 5.6e-47 191.8 121 77.7
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 5.6e-47 191.8 144 63.9
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 6.2e-46 188.3 154 63.0
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 3.1e-45 186.0 150 62.0
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.6e-44 183.0 175 53.7
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 3.4e-44 182.6 154 57.1
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-43 180.3 128 64.8
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-43 180.3 128 64.8
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 2.2e-43 179.9 128 66.4
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.2e-36 157.5 95 77.9
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 3.4e-36 156.0 192 48.4
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 8.4e-35 151.4 104 70.2
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 1.8e-32 143.7 82 82.9
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.0e-27 127.9 96 62.5
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 2.5e-23 113.2 87 64.4
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.5e-20 104.0 76 69.7
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 7.2e-18 95.1 99 50.5
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.5e-15 87.4 186 30.1
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 7.0e-13 78.6 50 70.0
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 2.2e-11 73.6 55 65.5
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 2.1e-09 67.0 37 70.3
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 2.1e-09 67.0 128 28.1


User provided reference genes

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