Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 8.8e-75 283.5 139 100.0
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.4e-67 259.6 139 90.6
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 4.4e-66 254.6 139 88.5
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.1e-64 250.0 136 87.5
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 2.3e-59 232.3 137 82.5
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.5e-58 229.6 137 81.8
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 4.4e-58 228.0 137 79.6
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 5.7e-58 227.6 135 80.7
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.3e-57 226.5 135 82.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.8e-57 225.3 135 79.3
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.8e-57 225.3 137 80.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 4.9e-57 224.6 135 83.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.9e-57 224.6 135 81.5
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 8.3e-57 223.8 137 80.3
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 78.8
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.4e-56 222.2 136 78.7
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.4e-56 222.2 136 80.1
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.1e-56 221.9 135 79.3
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.1e-56 221.9 135 79.3
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 5.4e-56 221.1 135 79.3
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 5.4e-56 221.1 136 79.4
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 7.0e-56 220.7 137 78.8
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 7.0e-56 220.7 134 80.6
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 9.1e-56 220.3 135 77.8
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 9.1e-56 220.3 137 78.8
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 9.1e-56 220.3 137 78.8
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 9.1e-56 220.3 137 78.8
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 9.1e-56 220.3 137 78.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 9.1e-56 220.3 137 78.1
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.2e-55 219.9 137 78.8
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.6e-55 219.5 136 77.9
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.6e-55 219.5 136 77.9
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 2.0e-55 219.2 137 78.1
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 2.0e-55 219.2 135 77.0
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.9e-55 217.6 137 78.1
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 7.7e-55 217.2 139 76.3
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 7.7e-55 217.2 137 75.9
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 7.7e-55 217.2 136 76.5
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 73.0
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 1.3e-54 216.5 138 77.5
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 138 77.5
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.3e-54 216.5 132 79.5
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 1.7e-54 216.1 138 77.5
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 1.7e-54 216.1 138 77.5
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 74.5
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.7e-54 216.1 136 77.9
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.3e-54 215.7 137 77.4
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 2.3e-54 215.7 136 77.9
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 2.3e-54 215.7 135 76.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 5.0e-54 214.5 135 76.3
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 76.6
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 8.6e-54 213.8 139 71.9
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.1e-53 213.4 136 76.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.5e-53 213.0 138 73.9
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 75.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.9e-53 212.6 137 76.6
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 2.5e-53 212.2 135 74.8
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.5e-53 212.2 137 73.7
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 3.3e-53 211.8 138 77.5
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 9.5e-53 210.3 136 75.7
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 9.5e-53 210.3 135 74.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.2e-52 209.9 134 74.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.6e-52 209.5 133 75.2
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.1e-52 209.1 134 73.1
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.1e-52 209.1 138 73.2
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 2.1e-52 209.1 137 73.7
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.8e-52 208.8 139 69.8
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 2.8e-52 208.8 136 72.8
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 2.8e-52 208.8 136 75.0
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 4.7e-52 208.0 135 72.6
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 8.0e-52 207.2 134 76.1
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 8.0e-52 207.2 137 74.5
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 8.0e-52 207.2 136 72.1
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.0e-51 206.8 135 71.9
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.4e-51 206.5 139 71.2
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.4e-51 206.5 135 73.3
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 2.3e-51 205.7 135 72.6
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.3e-51 205.7 137 72.3
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 2.3e-51 205.7 135 73.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 2.3e-51 205.7 137 73.0
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.0e-51 204.9 137 72.3
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 4.0e-51 204.9 135 74.1
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.2e-50 203.4 137 72.3
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.5e-50 203.0 128 77.3
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 2.0e-50 202.6 133 69.2
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 4.4e-50 201.4 135 71.1
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 7.5e-50 200.7 135 71.1
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.7e-49 199.5 136 70.6
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 2.9e-49 198.7 135 69.6
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 8.3e-49 197.2 131 73.3
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.4e-48 196.4 137 68.6
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 2.7e-47 192.2 138 68.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 1.6e-44 183.0 137 68.6
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 4.0e-43 178.3 136 65.4
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.9e-41 172.2 159 58.5
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.4e-40 169.9 131 61.8
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 1.0e-38 163.7 129 58.9
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 3.0e-38 162.2 114 72.8
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 3.3e-37 158.7 128 59.4
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.6e-36 156.4 95 81.1
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 2.1e-36 156.0 133 60.2
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 8.1e-36 154.1 131 62.6
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.1e-35 153.7 101 75.2
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.3e-35 152.5 157 55.4
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-34 149.8 94 73.4
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 5.8e-34 147.9 96 71.9
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 9.8e-34 147.1 135 60.7
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 1.1e-32 143.7 100 69.0
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 9.2e-32 140.6 135 58.5
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.0e-30 137.1 99 65.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 3.3e-29 132.1 135 55.6
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.1e-28 129.4 135 55.6
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 2.9e-25 119.0 96 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 3.3e-21 105.5 95 52.6
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.6e-20 103.2 135 44.4
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.1e-20 102.8 129 43.4
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 4.0e-19 98.6 62 72.6
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.5e-18 96.7 117 41.9
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.6e-18 95.9 135 43.7
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 5.8e-18 94.7 62 72.6
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 6.4e-17 91.3 126 38.1
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 4.2e-16 88.6 68 63.2
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.9e-13 79.7 44 81.8
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.6e-12 75.5 41 82.9
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 6.4e-09 64.7 37 78.4
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 8.4e-09 64.3 39 71.8
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 4.6e-07 58.5 32 81.2


User provided reference genes

Program Settings