Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3380 Erigeron canadensis HOM05D000060 ORTHO05D004147 2.5e-119 432.2 229 100.0
HanXRQChr02g0045431 Helianthus annuus HOM05D000060 ORTHO05D004147 3.5e-52 209.1 247 56.7
Lsat_1_v5_gn_1_11580 Lactuca sativa HOM05D000060 ORTHO05D004147 3.9e-43 179.1 264 48.5
Manes.14G073600 Manihot esculenta HOM05D000060 ORTHO05D004147 9.2e-29 131.3 227 42.7
Manes.06G097500 Manihot esculenta HOM05D000060 ORTHO05D004147 1.6e-28 130.6 228 44.7
QL10p014855 Quercus lobata HOM05D000060 ORTHO05D004147 8.6e-27 124.8 212 43.4
Cfa019015 Carpinus fangiana HOM05D000060 ORTHO05D004147 7.3e-26 121.7 220 42.7
Ciclev10021399m.g Citrus clementina HOM05D000060 ORTHO05D004147 3.6e-25 119.4 230 40.0
Sabra12G0051400 Salix brachista HOM05D000060 ORTHO05D004147 4.0e-24 115.9 217 40.1
Rhsim08G0161500 Rhododendron simsii HOM05D000060 ORTHO05D004147 6.8e-24 115.2 211 39.8
Duzib068G0121 Durio zibethinus HOM05D000060 ORTHO05D004147 8.9e-24 114.8 224 40.6
Oeu006171.1 Olea europaea HOM05D000060 ORTHO05D004147 2.0e-23 113.6 218 40.4
Lj9P457T89 Lonicera japonica HOM05D000060 ORTHO05D004147 2.6e-23 113.2 203 40.4
Potri.015G066700 Populus trichocarpa HOM05D000060 ORTHO05D004147 2.2e-22 110.2 217 39.2
Ciclev10029958m.g Citrus clementina HOM05D000060 ORTHO05D004147 3.7e-22 109.4 217 37.8
Lj5A118T70 Lonicera japonica HOM05D000060 ORTHO05D004147 3.7e-22 109.4 220 40.5
CiPaw.11G036600 Carya illinoinensis HOM05D000060 ORTHO05D004147 3.2e-21 106.3 224 39.7
Cc06_g20540 Coffea canephora HOM05D000060 ORTHO05D004147 3.2e-21 106.3 216 39.4
Potri.012G072000 Populus trichocarpa HOM05D000060 ORTHO05D004147 5.4e-21 105.5 218 37.6
Oeu039547.1 Olea europaea HOM05D000060 ORTHO05D004147 1.2e-20 104.4 212 38.7
Sabra15G0091700 Salix brachista HOM05D000060 ORTHO05D004147 3.5e-20 102.8 217 36.9
Cc04_g15940 Coffea canephora HOM05D000060 ORTHO05D004147 1.0e-19 101.3 219 38.4
Thecc.06G216600 Theobroma cacao HOM05D000060 ORTHO05D004147 2.3e-19 100.1 220 34.1
Duzib084G1228 Durio zibethinus HOM05D000060 ORTHO05D004147 3.9e-19 99.4 230 36.1
GSVIVG01008080001 Vitis vinifera HOM05D000060 ORTHO05D004147 6.6e-19 98.6 218 38.5
Atru.chr9.2338 Acer truncatum HOM05D000060 ORTHO05D004147 8.6e-19 98.2 217 37.8
Lj4g0004630 Lotus japonicus HOM05D000060 ORTHO05D004147 1.1e-18 97.8 214 37.4
CSS0048992 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D004147 1.5e-18 97.4 209 37.8
TAR622G0069 Trochodendron aralioides HOM05D000060 ORTHO05D004147 1.5e-18 97.4 224 38.8
Hma1.2p1_0104F.1_g050410 Hydrangea macrophylla HOM05D000060 ORTHO05D004147 1.9e-18 97.1 232 37.9
Nitab4.5_0007282g0050 Nicotiana tabacum HOM05D000060 ORTHO05D004147 1.9e-18 97.1 236 36.9
Nitab4.5_0004478g0030 Nicotiana tabacum HOM05D000060 ORTHO05D004147 3.3e-18 96.3 236 36.0
Sopen03g032410 Solanum pennellii HOM05D000060 ORTHO05D004147 4.3e-18 95.9 229 37.6
CSS0000202 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D004147 2.1e-17 93.6 220 38.2
FAN13G2158 Fragaria x ananassa HOM05D000060 ORTHO05D004147 4.7e-17 92.4 220 34.1
Actinidia04932 Actinidia chinensis HOM05D000060 ORTHO05D004147 1.1e-16 91.3 217 37.8
COL.COLO4_35466 Corchorus olitorius HOM05D000060 ORTHO05D004147 1.1e-16 91.3 223 37.7
Gohir.D03G090500 Gossypium hirsutum HOM05D000060 ORTHO05D004147 1.1e-16 91.3 220 34.1
Gohir.D11G032000 Gossypium hirsutum HOM05D000060 ORTHO05D004147 2.4e-16 90.1 223 36.3
Gorai.003G070700 Gossypium raimondii HOM05D000060 ORTHO05D004147 4.0e-16 89.4 220 33.6
arahy.Tifrunner.gnm1.ann1.7GBK1F Arachis hypogaea HOM05D000060 ORTHO05D004147 1.2e-15 87.8 220 37.7
Ca_21859_v3 Cicer arietinum L. HOM05D000060 ORTHO05D004147 1.2e-15 87.8 226 37.2
EL10Ac5g10919 Beta vulgaris HOM05D000060 ORTHO05D004147 1.5e-15 87.4 214 33.2
CAN.G999.32 Capsicum annuum HOM05D000060 ORTHO05D004147 1.5e-15 87.4 217 36.4
Gohir.A03G064100 Gossypium hirsutum HOM05D000060 ORTHO05D004147 1.5e-15 87.4 232 31.9
MD14G1191900 Malus domestica HOM05D000060 ORTHO05D004147 1.5e-15 87.4 248 35.5
Aqoxy3G00820 Aquilegia oxysepala HOM05D000060 ORTHO05D004147 2.0e-15 87.0 218 37.2
Solyc03g113360.4 Solanum lycopersicum HOM05D000060 ORTHO05D004147 2.0e-15 87.0 230 36.1
arahy.Tifrunner.gnm1.ann1.M26628 Arachis hypogaea HOM05D000060 ORTHO05D004147 4.4e-15 85.9 220 38.2
PSO591G0239 Papaver somniferum HOM05D000060 ORTHO05D004147 4.4e-15 85.9 236 30.9
Gohir.A11G028720 Gossypium hirsutum HOM05D000060 ORTHO05D004147 5.8e-15 85.5 225 35.1
Lalb_Chr13g0298131 Lupinus albus HOM05D000060 ORTHO05D004147 7.6e-15 85.1 213 34.7
Prupe.5G184500 Prunus persica HOM05D000060 ORTHO05D004147 7.6e-15 85.1 221 32.6
Haze_07395 Corylus avellana HOM05D000060 ORTHO05D004147 9.9e-15 84.7 227 36.6
PGSC0003DMG400013182 Solanum tuberosum HOM05D000060 ORTHO05D004147 9.9e-15 84.7 228 32.9
PGR083G2012 Punica granatum HOM05D000060 ORTHO05D004147 1.3e-14 84.3 222 33.3
FAN08G1988 Fragaria x ananassa HOM05D000060 ORTHO05D004147 2.2e-14 83.6 220 32.7
Cpa.g.sc17.185 Carica papaya HOM05D000060 ORTHO05D004147 6.4e-14 82.0 207 32.9
Lalb_Chr07g0182351 Lupinus albus HOM05D000060 ORTHO05D004147 6.4e-14 82.0 200 35.0
PSO832G3465 Papaver somniferum HOM05D000060 ORTHO05D004147 8.4e-14 81.6 236 29.7
VMungo1215G1633 Vigna mungo HOM05D000060 ORTHO05D004147 8.4e-14 81.6 213 33.8
AUR62021755 Chenopodium quinoa HOM05D000060 ORTHO05D004147 1.9e-13 80.5 196 33.2
FvH4_5g15770 Fragaria vesca HOM05D000060 ORTHO05D004147 4.2e-13 79.3 233 32.2
FAN18G1554 Fragaria x ananassa HOM05D000060 ORTHO05D004147 4.2e-13 79.3 233 32.2
MD06G1185700 Malus domestica HOM05D000060 ORTHO05D004147 5.4e-13 79.0 225 32.0
Gorai.007G034800 Gossypium raimondii HOM05D000060 ORTHO05D004147 7.1e-13 78.6 227 33.9
Lalb_Chr12g0201221 Lupinus albus HOM05D000060 ORTHO05D004147 1.2e-12 77.8 209 34.4
MBI04_g33687_MAGBIO Magnolia biondii HOM05D000060 ORTHO05D004147 1.6e-12 77.4 210 34.3
MBI04_g46312_MAGBIO Magnolia biondii HOM05D000060 ORTHO05D004147 1.6e-12 77.4 210 34.3
Phvul.003G194300 Phaseolus vulgaris HOM05D000060 ORTHO05D004147 2.7e-12 76.6 221 33.0
Thhalv10011007m.g Eutrema salsugineum HOM05D000060 ORTHO05D004147 6.0e-12 75.5 243 32.9
Sc04g0002320 Simmondsia chinensis HOM05D000060 ORTHO05D004147 7.8e-12 75.1 205 33.7
ClCG09G018450 Citrullus lanatus HOM05D000060 ORTHO05D004147 1.3e-11 74.3 223 32.3
DCAR_021542 Daucus carota HOM05D000060 ORTHO05D004147 3.9e-11 72.8 205 33.2
Dinv19902 Davidia involucrata HOM05D000060 ORTHO05D004147 6.6e-11 72.0 206 37.4
SalBow7G0691 Salvia bowleyana HOM05D001961 ORTHO05D002286 1.5e-10 70.9 203 32.5
RcHm_v2.0_Chr7g0180351 Rosa chinensis HOM05D000060 ORTHO05D004147 1.9e-10 70.5 229 31.0
FAN04G1573 Fragaria x ananassa HOM05D000060 ORTHO05D004147 3.3e-10 69.7 200 32.5
Nn3g17099 Nelumbo nucifera HOM05D000060 ORTHO05D004147 4.3e-10 69.3 213 31.5
RcHm_v2.0_Chr2g0169321 Rosa chinensis HOM05D000060 ORTHO05D004147 5.6e-10 68.9 232 35.3
CSS0018462 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D004147 7.3e-10 68.6 209 33.0
CSS0007242 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D004147 9.6e-10 68.2 209 33.0
CsaV3_5G037790 Cucumis sativus L. HOM05D000060 ORTHO05D004147 1.3e-09 67.8 222 29.7
TWI60G1447 Tripterygium wilfordii HOM05D000060 ORTHO05D004147 2.8e-09 66.6 221 33.0
FAN14G3526 Fragaria x ananassa HOM05D000060 ORTHO05D004147 3.6e-09 66.2 226 35.4
Sp5g14060 Schrenkiella parvula HOM05D000060 ORTHO05D004147 3.6e-09 66.2 237 30.4
FvH4_6g49430 Fragaria vesca HOM05D000060 ORTHO05D004147 4.8e-09 65.9 221 34.8
Medtr4g107450 Medicago truncatula HOM05D000060 ORTHO05D004147 4.8e-09 65.9 215 31.6
Prupe.3G273200 Prunus persica HOM05D000060 ORTHO05D004147 4.8e-09 65.9 224 31.7
Actinidia37667 Actinidia chinensis HOM05D000060 ORTHO05D004147 6.2e-09 65.5 208 33.2
Carub.0005s1402 Capsella rubella HOM05D000060 ORTHO05D004147 6.2e-09 65.5 246 32.1
CDE06G1247 Ceratophyllum demersum HOM05D000060 ORTHO05D004147 6.2e-09 65.5 223 30.0
FAN05G4743 Fragaria x ananassa HOM05D000060 ORTHO05D004147 6.2e-09 65.5 221 33.9
Aqoxy3G03234 Aquilegia oxysepala HOM05D000060 ORTHO05D004147 8.1e-09 65.1 232 31.9
FAN09G2807 Fragaria x ananassa HOM05D000060 ORTHO05D004147 8.1e-09 65.1 226 35.0
BcaC01g01768 Brassica carinata HOM05D000060 ORTHO05D004147 1.1e-08 64.7 228 32.9
TPR.G38390 Trifolium pratense HOM05D000060 ORTHO05D004147 1.1e-08 64.7 219 31.1
MELO3C021964.2 Cucumis melo HOM05D000060 ORTHO05D004147 1.8e-08 63.9 219 30.6
Oeu060914.1 Olea europaea HOM05D000060 ORTHO05D004147 1.8e-08 63.9 218 32.6
A06p19760 Brassica napus HOM05D000060 ORTHO05D004147 2.4e-08 63.5 228 31.6
C03p72120 Brassica napus HOM05D000060 ORTHO05D004147 2.4e-08 63.5 229 32.3
BraA06t25055Z Brassica rapa HOM05D000060 ORTHO05D004147 2.4e-08 63.5 228 31.6
FAN02G2735 Fragaria x ananassa HOM05D000060 ORTHO05D004147 3.1e-08 63.2 226 35.4
Lj1g0019376 Lotus japonicus HOM05D000060 ORTHO05D004147 3.1e-08 63.2 209 29.7
PSO478G0404 Papaver somniferum HOM05D000060 ORTHO05D004147 3.1e-08 63.2 218 32.6
MD09G1045500 Malus domestica HOM05D000060 ORTHO05D004147 4.0e-08 62.8 230 32.2
BolC3t19508H Brassica oleracea HOM05D000060 ORTHO05D004147 5.3e-08 62.4 229 32.3
Nn4g23003 Nelumbo nucifera HOM05D000060 ORTHO05D004147 1.2e-07 61.2 178 32.0
PSO161G0031 Papaver somniferum HOM05D000060 ORTHO05D004147 1.2e-07 61.2 215 34.9
Lsat_1_v5_gn_5_18480 Lactuca sativa HOM05D000060 ORTHO05D004147 1.5e-07 60.8 84 47.6
SGA_v2.0_scaffold114G31886 Striga asiatica HOM05D000060 ORTHO05D004147 1.5e-07 60.8 223 30.9
AT3G47870 Arabidopsis thaliana HOM05D000060 ORTHO05D004147 2.0e-07 60.5 246 29.7
BcaB01g00867 Brassica carinata HOM05D000060 ORTHO05D004147 2.0e-07 60.5 233 29.6
Rhsim10G0031000 Rhododendron simsii HOM05D000060 ORTHO05D004147 2.0e-07 60.5 204 33.3
BcaB05g23085 Brassica carinata HOM05D000060 ORTHO05D004147 2.6e-07 60.1 245 28.6
AL5G27210 Arabidopsis lyrata HOM05D000060 ORTHO05D004147 3.4e-07 59.7 251 28.7
Peaxi162Scf00009g00525 Petunia axillaris HOM05D000060 ORTHO05D004147 3.4e-07 59.7 209 27.8
CSS0012579 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D004147 5.8e-07 58.9 130 37.7
Oeu033345.1 Olea europaea HOM05D000060 ORTHO05D004147 5.8e-07 58.9 214 28.0
CARHR156610 Cardamine hirsuta HOM05D000060 ORTHO05D004147 1.3e-06 57.8 254 27.2
SalBow5G1584 Salvia bowleyana HOM05D000060 ORTHO05D004147 1.3e-06 57.8 216 30.6
Cc04_g15810 Coffea canephora HOM05D000060 ORTHO05D004147 2.2e-06 57.0 246 25.2
Dinv33697 Davidia involucrata HOM05D000060 ORTHO05D004147 2.2e-06 57.0 207 31.9
Dinv38650 Davidia involucrata HOM05D000060 ORTHO05D004147 2.2e-06 57.0 51 64.7
Sed0027494 Sechium edule HOM05D000060 ORTHO05D004147 3.8e-06 56.2 219 29.2
PGSC0003DMG400038771 Solanum tuberosum HOM05D000060 ORTHO05D000082 3.8e-06 56.2 50 54.0
Oeu020373.1 Olea europaea HOM05D000060 ORTHO05D000082 4.9e-06 55.8 56 51.8
BolC1t03191H Brassica oleracea HOM05D000060 ORTHO05D004147 6.4e-06 55.5 244 29.1
CDE08G0873 Ceratophyllum demersum HOM05D000060 ORTHO05D004147 6.4e-06 55.5 231 29.0
SEGI_21130 Sequoiadendron giganteum HOM05D000060 ORTHO05D004147 6.4e-06 55.5 68 47.1


User provided reference genes

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