Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 7.5e-135 483.8 234 100.0
ECA238G0762 Erigeron canadensis HOM05D001043 ORTHO05D001555 2.3e-43 179.9 90 92.2
ECA233G1252 Erigeron canadensis HOM05D010064 ORTHO05D188271 4.4e-42 175.6 89 91.0
ECA233G3095 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.4e-42 175.6 89 91.0
ECA240G4785 Erigeron canadensis HOM05D010064 ORTHO05D187556 4.4e-42 175.6 89 92.1
ECA240G0241 Erigeron canadensis HOM05D010064 ORTHO05D001555 7.4e-42 174.9 89 91.0
ECA248G3288 Erigeron canadensis HOM05D000006 ORTHO05D189125 2.8e-41 172.9 89 88.8
ECA234G2660 Erigeron canadensis HOM05D010064 ORTHO05D001555 1.1e-40 171.0 89 88.8
ECA247G1298 Erigeron canadensis HOM05D010064 ORTHO05D186798 2.4e-40 169.9 89 88.8
ECA233G2039 Erigeron canadensis HOM05D010064 ORTHO05D186726 3.4e-39 166.0 89 87.6
ECA238G4831 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.2e-38 163.3 89 87.6
ECA234G3800 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-37 161.0 125 67.2
ECA240G1838 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.9e-37 160.2 89 85.4
ECA240G2775 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.9e-37 160.2 90 86.7
ECA247G0115 Erigeron canadensis HOM05D010064 ORTHO05D188157 5.2e-35 152.1 74 93.2
ECA246G5038 Erigeron canadensis HOM05D000006 ORTHO05D000044 1.5e-34 150.6 78 89.7
ECA247G1823 Erigeron canadensis HOM05D000006 ORTHO05D187895 2.0e-34 150.2 77 90.9
ECA233G3573 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.1e-32 142.9 70 91.4
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.2e-31 141.0 67 97.0
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 2.5e-29 133.3 67 88.1
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 1.0e-27 127.9 68 83.8
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.7e-25 120.6 68 77.9
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 3.7e-25 119.4 68 77.9
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 3.7e-25 119.4 85 67.1
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 3.7e-25 119.4 85 67.1
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 4.8e-25 119.0 85 68.2
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 4.8e-25 119.0 85 67.1
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 4.8e-25 119.0 67 79.1
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 6.3e-25 118.6 68 73.5
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 6.3e-25 118.6 68 75.0
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 8.2e-25 118.2 85 65.9
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.4e-24 117.5 67 77.6
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.4e-24 117.5 67 79.1
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.8e-24 117.1 67 79.1
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.8e-24 117.1 67 79.1
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 1.8e-24 117.1 68 76.5
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 2.4e-24 116.7 68 76.5
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 2.4e-24 116.7 85 65.9
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 3.1e-24 116.3 98 59.2
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 4.1e-24 115.9 85 67.1
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 5.3e-24 115.5 68 75.0
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 7.0e-24 115.2 68 77.9
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 7.0e-24 115.2 68 75.0
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 7.0e-24 115.2 68 70.6
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 7.0e-24 115.2 68 73.5
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 9.1e-24 114.8 67 74.6
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 9.1e-24 114.8 68 75.0
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 9.1e-24 114.8 68 72.1
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.2e-23 114.4 115 52.2
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 1.6e-23 114.0 68 75.0
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.6e-23 114.0 67 76.1
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 2.0e-23 113.6 68 73.5
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 2.0e-23 113.6 68 73.5
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 2.0e-23 113.6 68 72.1
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 2.7e-23 113.2 68 72.1
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 2.7e-23 113.2 67 76.1
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.7e-23 113.2 68 73.5
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 3.5e-23 112.8 68 72.1
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 3.5e-23 112.8 68 73.5
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 3.5e-23 112.8 85 61.2
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 3.5e-23 112.8 68 72.1
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 4.5e-23 112.5 84 63.1
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 4.5e-23 112.5 85 63.5
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 4.5e-23 112.5 67 76.1
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 5.9e-23 112.1 68 73.5
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 5.9e-23 112.1 68 72.1
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 5.9e-23 112.1 66 72.7
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 5.9e-23 112.1 84 63.1
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 7.7e-23 111.7 85 63.5
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 7.7e-23 111.7 68 70.6
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 7.7e-23 111.7 68 70.6
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 7.7e-23 111.7 68 70.6
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 7.7e-23 111.7 67 73.1
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 7.7e-23 111.7 67 71.6
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.0e-22 111.3 68 73.5
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.0e-22 111.3 68 75.0
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.0e-22 111.3 68 73.5
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.0e-22 111.3 67 74.6
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.0e-22 111.3 68 73.5
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.3e-22 110.9 85 61.2
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 1.3e-22 110.9 68 70.6
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 1.3e-22 110.9 68 76.5
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 1.3e-22 110.9 68 70.6
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.3e-22 110.9 68 73.5
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 1.7e-22 110.5 85 64.7
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 1.7e-22 110.5 67 71.6
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 2.2e-22 110.2 68 69.1
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 2.2e-22 110.2 85 61.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 2.2e-22 110.2 68 72.1
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 2.2e-22 110.2 68 72.1
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 2.9e-22 109.8 97 57.7
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 2.9e-22 109.8 83 62.7
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.8e-22 109.4 68 69.1
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 5.0e-22 109.0 115 51.3
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.0e-22 109.0 67 73.1
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 5.0e-22 109.0 65 72.3
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 5.0e-22 109.0 69 68.1
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 5.0e-22 109.0 68 70.6
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 6.5e-22 108.6 68 75.0
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 6.5e-22 108.6 68 70.6
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 8.5e-22 108.2 68 72.1
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 8.5e-22 108.2 68 69.1
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 8.5e-22 108.2 68 72.1
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 1.1e-21 107.8 67 71.6
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.1e-21 107.8 85 60.0
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 1.5e-21 107.5 85 61.2
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.5e-21 107.5 67 71.6
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 1.5e-21 107.5 68 72.1
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.5e-21 107.5 68 70.6
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 1.9e-21 107.1 85 60.0
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.9e-21 107.1 68 72.1
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.9e-21 107.1 67 68.7
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 1.9e-21 107.1 117 46.2
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 1.9e-21 107.1 68 73.5
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.9e-21 107.1 68 70.6
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 1.9e-21 107.1 68 69.1
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 2.5e-21 106.7 85 61.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.5e-21 106.7 68 70.6
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 2.5e-21 106.7 68 66.2
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 2.5e-21 106.7 68 70.6
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 3.2e-21 106.3 85 60.0
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 3.2e-21 106.3 85 60.0
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.2e-21 105.9 85 62.4
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 4.2e-21 105.9 66 69.7
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 7.2e-21 105.1 83 59.0
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 7.2e-21 105.1 68 69.1
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 9.4e-21 104.8 85 61.2
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 9.4e-21 104.8 85 60.0
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 9.4e-21 104.8 68 72.1
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 9.4e-21 104.8 67 71.6
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 9.4e-21 104.8 68 69.1
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.2e-20 104.4 68 66.2
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 2.1e-20 103.6 68 63.2
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 2.7e-20 103.2 68 70.6
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.7e-20 103.2 67 68.7
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 3.6e-20 102.8 68 64.7
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 4.7e-20 102.4 68 69.1
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 8.0e-20 101.7 85 57.6
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.3e-19 100.1 68 67.6
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 2.3e-19 100.1 67 65.7
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 2.3e-19 100.1 84 54.8
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 6.8e-19 98.6 64 68.8
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 6.8e-19 98.6 68 58.8
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.2e-18 97.8 68 66.2
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 7.5e-18 95.1 68 61.8
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 7.5e-18 95.1 67 61.2
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 4.8e-17 92.4 85 50.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 5.9e-15 85.5 65 61.5
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.5e-13 80.1 58 65.5
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 6.1e-12 75.5 64 54.7
ECA232G1904 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.0e-11 73.2 84 48.8
ECA246G0722 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.0e-11 73.2 55 63.6
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 3.0e-11 73.2 69 53.6
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.7e-09 67.4 66 47.0
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 1.7e-09 67.4 68 54.4
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 3.7e-09 66.2 36 75.0
ECA238G0388 Erigeron canadensis HOM05D001126 ORTHO05D000991 1.1e-08 64.7 32 100.0
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 5.4e-08 62.4 39 64.1
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.0e-07 60.5 39 61.5
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 7.8e-07 58.5 122 33.6


User provided reference genes

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