Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3220 Erigeron canadensis HOM05D003021 ORTHO05D002235 1.2e-197 693.3 442 100.0
Lsat_1_v5_gn_1_13781 Lactuca sativa HOM05D003021 ORTHO05D002235 1.8e-41 174.5 460 47.6
ECA232G0219 Erigeron canadensis HOM05D003021 ORTHO05D002235 3.8e-23 113.6 479 29.9
PGSC0003DMG400033052 Solanum tuberosum HOM05D003021 ORTHO05D002235 1.4e-17 95.1 462 27.7
HanXRQChr16g0502531 Helianthus annuus HOM05D003021 ORTHO05D002235 2.0e-16 91.3 119 47.9
Solyc06g069620.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 3.8e-15 87.0 461 29.9
TAR622G0013 Trochodendron aralioides HOM05D003021 ORTHO05D002235 1.4e-12 78.6 145 37.9
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 1.8e-12 78.2 125 44.8
Sopen06g026920 Solanum pennellii HOM05D003021 ORTHO05D002235 1.8e-12 78.2 447 29.1
CAN.G587.19 Capsicum annuum HOM05D003021 ORTHO05D002235 3.0e-12 77.4 148 36.5
Atru.chr8.382 Acer truncatum HOM05D003021 ORTHO05D002235 6.8e-12 76.3 109 44.0
Peaxi162Scf00274g00005 Petunia axillaris HOM05D003021 ORTHO05D022173 8.9e-12 75.9 113 52.2
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 8.9e-12 75.9 115 40.9
FvH4_6g47500 Fragaria vesca HOM05D003021 ORTHO05D002235 1.5e-11 75.1 146 42.5
FAN14G5480 Fragaria x ananassa HOM05D003021 ORTHO05D002235 1.5e-11 75.1 146 42.5
Nitab4.5_0001211g0040 Nicotiana tabacum HOM05D003021 ORTHO05D022173 2.0e-11 74.7 114 51.8
EL10Ac2g03069 Beta vulgaris HOM05D003021 ORTHO05D002235 3.4e-11 73.9 140 40.7
FAN09G3860 Fragaria x ananassa HOM05D003021 ORTHO05D002235 3.4e-11 73.9 146 42.5
Solyc02g088580.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 3.4e-11 73.9 136 39.0
Sopen02g033310 Solanum pennellii HOM05D003021 ORTHO05D002235 3.4e-11 73.9 136 39.0
PGSC0003DMG400001352 Solanum tuberosum HOM05D003021 ORTHO05D002235 3.4e-11 73.9 136 39.0
Ah.10g031940 Amaranthus hybridus HOM05D003021 ORTHO05D002235 5.7e-11 73.2 110 40.9
Actinidia09241 Actinidia chinensis HOM05D003021 ORTHO05D002235 7.5e-11 72.8 144 36.8
Ca_04869_v3 Cicer arietinum L. HOM05D003021 ORTHO05D002235 9.8e-11 72.4 143 41.3
FAN05G2768 Fragaria x ananassa HOM05D003021 ORTHO05D002235 9.8e-11 72.4 146 41.8
Nitab4.5_0002881g0010 Nicotiana tabacum HOM05D003021 ORTHO05D022173 9.8e-11 72.4 113 51.3
Prupe.3G258800 Prunus persica HOM05D003021 ORTHO05D002235 9.8e-11 72.4 126 42.1
CAN.G479.38 Capsicum annuum HOM05D003021 ORTHO05D022173 1.3e-10 72.0 113 49.6
Cfa007625 Carpinus fangiana HOM05D003021 ORTHO05D002235 1.3e-10 72.0 125 44.0
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 1.3e-10 72.0 146 41.1
Haze_14471 Corylus avellana HOM05D003021 ORTHO05D002235 2.2e-10 71.2 123 44.7
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 2.9e-10 70.9 138 40.6
MD09G1061400 Malus domestica HOM05D003021 ORTHO05D002235 4.9e-10 70.1 144 37.5
Medtr6g013485 Medicago truncatula HOM05D003021 ORTHO05D002235 6.4e-10 69.7 143 44.1
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 8.3e-10 69.3 124 41.9
Nitab4.5_0008213g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 8.3e-10 69.3 141 38.3
Sc04g0002990 Simmondsia chinensis HOM05D003021 ORTHO05D002235 8.3e-10 69.3 145 32.4
CAN.G479.36 Capsicum annuum HOM05D003021 ORTHO05D002235 1.1e-09 68.9 140 45.0
CiPaw.04G058300 Carya illinoinensis HOM05D003021 ORTHO05D002235 1.4e-09 68.6 149 40.3
RcHm_v2.0_Chr2g0166531 Rosa chinensis HOM05D003021 ORTHO05D002235 1.4e-09 68.6 139 42.4
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 1.8e-09 68.2 119 47.9
Migut.D01745 Erythranthe guttata HOM05D003021 ORTHO05D002235 1.8e-09 68.2 140 37.1
Eucgr.B00563 Eucalyptus grandis HOM05D003021 ORTHO05D002235 1.8e-09 68.2 131 38.2
PSO063G0327 Papaver somniferum HOM05D003021 ORTHO05D002235 1.8e-09 68.2 125 44.0
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 1.8e-09 68.2 127 42.5
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 2.4e-09 67.8 126 42.1
Nitab4.5_0006673g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 2.4e-09 67.8 472 27.3
PSO013G0053 Papaver somniferum HOM05D003021 ORTHO05D002235 2.4e-09 67.8 119 45.4
PGSC0003DMG400024656 Solanum tuberosum HOM05D003021 ORTHO05D022173 2.4e-09 67.8 113 48.7
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 2.4e-09 67.8 146 39.7
Nitab4.5_0000565g0110 Nicotiana tabacum HOM05D003021 ORTHO05D002235 3.2e-09 67.4 139 38.8
AUR62021603 Chenopodium quinoa HOM05D003021 ORTHO05D002235 4.1e-09 67.0 116 44.8
PSO017G1133 Papaver somniferum HOM05D003021 ORTHO05D002235 4.1e-09 67.0 134 37.3
Ah.02g113870 Amaranthus hybridus HOM05D003021 ORTHO05D002235 5.4e-09 66.6 126 36.5
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 5.4e-09 66.6 149 39.6
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 5.4e-09 66.6 128 43.8
Lj9P468T32 Lonicera japonica HOM05D003021 ORTHO05D002235 5.4e-09 66.6 132 37.1
Sopen03g034540 Solanum pennellii HOM05D003021 ORTHO05D022173 5.4e-09 66.6 144 36.8
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 7.0e-09 66.2 111 48.6
Sed0010326 Sechium edule HOM05D003021 ORTHO05D002235 7.0e-09 66.2 136 38.2
TPR.G26183 Trifolium pratense HOM05D003021 ORTHO05D002235 7.0e-09 66.2 146 37.0
BcaB01g05057 Brassica carinata HOM05D009950 ORTHO05D002235 9.2e-09 65.9 151 39.1
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 9.2e-09 65.9 142 38.7
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 9.2e-09 65.9 139 40.3
THA.LOC104802964 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 9.2e-09 65.9 112 45.5
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.6e-08 65.1 148 41.2
Sed0026957 Sechium edule HOM05D003021 ORTHO05D002235 1.6e-08 65.1 184 29.9
SGA_v2.0_scaffold52G19187 Striga asiatica HOM05D003021 ORTHO05D002235 1.6e-08 65.1 153 35.3
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.0e-08 64.7 148 41.2
PGR083G2506 Punica granatum HOM05D003021 ORTHO05D002235 2.0e-08 64.7 141 42.6
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 3.5e-08 63.9 150 39.3
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 4.6e-08 63.5 143 39.9
MSTRG.15459 Avicennia marina HOM05D003021 ORTHO05D002235 5.9e-08 63.2 141 34.0
MSTRG.4448 Avicennia marina HOM05D003021 ORTHO05D002235 5.9e-08 63.2 142 35.2
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 5.9e-08 63.2 135 40.7
ECA238G3698 Erigeron canadensis HOM05D003021 ORTHO05D002235 5.9e-08 63.2 107 36.4
CAN.G1627.8 Capsicum annuum HOM05D003021 ORTHO05D002065 7.8e-08 62.8 142 38.7
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 7.8e-08 62.8 118 42.4
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 7.8e-08 62.8 142 38.7
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 7.8e-08 62.8 142 38.7
Nitab4.5_0003021g0020 Nicotiana tabacum HOM05D003021 ORTHO05D002235 7.8e-08 62.8 469 27.5
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 7.8e-08 62.8 142 38.0
Os03g0211400 Oryza sativa ssp. japonica HOM05D003021 ORTHO05D002235 7.8e-08 62.8 129 40.3
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 7.8e-08 62.8 126 37.3
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 1.0e-07 62.4 126 42.9
Peaxi162Scf00166g00071 Petunia axillaris HOM05D003021 ORTHO05D002235 1.0e-07 62.4 139 34.5
arahy.Tifrunner.gnm1.ann1.JN5ZJX Arachis hypogaea HOM05D003021 ORTHO05D002235 1.7e-07 61.6 147 36.1
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.7e-07 61.6 138 42.0
Peaxi162Scf00013g00052 Petunia axillaris HOM05D003021 ORTHO05D002235 1.7e-07 61.6 468 25.0
Sc10g0003280 Simmondsia chinensis HOM05D003021 ORTHO05D002235 2.3e-07 61.2 147 35.4
CAN.G1164.2 Capsicum annuum HOM05D003021 ORTHO05D002235 3.0e-07 60.8 145 35.2
CARHR197890 Cardamine hirsuta HOM05D009950 ORTHO05D002235 3.0e-07 60.8 115 37.4
MELO3C002008.2 Cucumis melo HOM05D003021 ORTHO05D002235 3.0e-07 60.8 175 31.4
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 3.0e-07 60.8 121 39.7
Glyma.19G027500 Glycine max HOM05D003021 ORTHO05D002235 3.0e-07 60.8 150 35.3
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 3.0e-07 60.8 147 36.7
AT5G15430 Arabidopsis thaliana HOM05D009950 ORTHO05D002235 3.9e-07 60.5 147 38.8
CARHR205360 Cardamine hirsuta HOM05D009040 ORTHO05D002235 5.0e-07 60.1 141 34.8
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 5.0e-07 60.1 133 38.3
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 5.0e-07 60.1 51 64.7
ClCG04G012000 Citrullus lanatus HOM05D003021 ORTHO05D002235 6.6e-07 59.7 185 30.8
CsaV3_1G005770 Cucumis sativus L. HOM05D003021 ORTHO05D002235 6.6e-07 59.7 132 37.1
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 6.6e-07 59.7 149 32.9
DCAR_011056 Daucus carota HOM05D003021 ORTHO05D002235 1.1e-06 58.9 144 35.4
Dinv38770 Davidia involucrata HOM05D003021 ORTHO05D002235 1.1e-06 58.9 112 40.2
FAN08G3689 Fragaria x ananassa HOM05D003021 ORTHO05D002235 1.1e-06 58.9 95 42.1
Psat6g146680 Pisum sativum HOM05D003021 ORTHO05D002235 1.1e-06 58.9 143 39.2
PGR083G1105 Punica granatum HOM05D003021 ORTHO05D002235 1.1e-06 58.9 121 33.1
A03p07130 Brassica napus HOM05D009950 ORTHO05D002235 1.5e-06 58.5 118 44.1
CAN.G411.102 Capsicum annuum HOM05D003021 ORTHO05D002235 1.5e-06 58.5 136 41.2
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 1.5e-06 58.5 139 36.7
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 1.9e-06 58.2 132 35.6
Oeu016158.1 Olea europaea HOM05D003021 ORTHO05D002235 1.9e-06 58.2 120 39.2
THA.LOC104801387 Tarenaya hassleriana HOM05D009040 ORTHO05D002235 1.9e-06 58.2 112 39.3
BraA03t10035Z Brassica rapa HOM05D009950 ORTHO05D002235 2.5e-06 57.8 117 43.6
Potri.015G049600 Populus trichocarpa HOM05D003021 ORTHO05D002235 2.5e-06 57.8 117 36.8
HPP92_020422 Vanilla planifolia HOM05D003021 ORTHO05D002235 2.5e-06 57.8 161 32.3
Aa31LG3G18640 Aethionema arabicum HOM05D009040 ORTHO05D002235 3.3e-06 57.4 113 36.3
AL6G26280 Arabidopsis lyrata HOM05D009950 ORTHO05D002235 3.3e-06 57.4 141 36.9
arahy.Tifrunner.gnm1.ann1.Y4RXEQ Arachis hypogaea HOM05D003021 ORTHO05D002235 3.3e-06 57.4 147 33.3
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.3e-06 57.4 441 25.9
FAN13G0757 Fragaria x ananassa HOM05D003021 ORTHO05D002235 3.3e-06 57.4 95 41.1
unitig_744.g24000 Utricularia gibba HOM05D003021 ORTHO05D002235 3.3e-06 57.4 137 37.2
BolC3t13309H Brassica oleracea HOM05D009950 ORTHO05D002235 4.3e-06 57.0 464 25.2
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 4.3e-06 57.0 67 49.3
Phvul.004G033600 Phaseolus vulgaris HOM05D003021 ORTHO05D002235 4.3e-06 57.0 137 37.2
Sed0023229 Sechium edule HOM05D003021 ORTHO05D002235 4.3e-06 57.0 115 37.4
Zm00001eb029730 Zea mays HOM05D049656 ORTHO05D002235 4.3e-06 57.0 114 36.0
arahy.Tifrunner.gnm1.ann1.MP0IU4 Arachis hypogaea HOM05D003021 ORTHO05D002235 5.6e-06 56.6 147 32.7
AUR62008485 Chenopodium quinoa HOM05D003021 ORTHO05D002235 5.6e-06 56.6 57 54.4
QL10p018571 Quercus lobata HOM05D003021 ORTHO05D002235 5.6e-06 56.6 171 31.6
Sed0006399 Sechium edule HOM05D003021 ORTHO05D002235 5.6e-06 56.6 159 33.3
SGA_v2.0_scaffold121G33085 Striga asiatica HOM05D003021 ORTHO05D002235 5.6e-06 56.6 116 32.8
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 7.3e-06 56.2 146 37.7
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.3e-06 56.2 117 35.9
SGA_v2.0_scaffold154G37085 Striga asiatica HOM05D003021 ORTHO05D002235 7.3e-06 56.2 68 47.1
C03p08120 Brassica napus HOM05D009950 ORTHO05D002235 9.5e-06 55.8 151 37.7
Medtr4g109220 Medicago truncatula HOM05D014856 ORTHO05D002235 9.5e-06 55.8 157 31.8


User provided reference genes

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