Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.7e-173 612.5 289 100.0
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 6.6e-125 451.1 298 74.8
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 6.2e-107 391.3 292 70.9
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 2.9e-96 355.9 324 59.0
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.9e-92 343.2 322 58.7
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 9.7e-92 340.9 318 58.5
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.3e-91 340.5 324 56.8
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.2e-91 337.8 322 58.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 6.5e-88 328.2 321 54.5
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 8.5e-88 327.8 321 54.2
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.5e-87 326.2 326 56.4
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 4.2e-87 325.5 323 55.1
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.2e-87 324.7 328 55.5
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.6e-86 323.6 323 55.4
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.7e-86 322.8 320 53.4
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.7e-86 322.8 322 55.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.1e-86 321.6 321 54.8
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.1e-86 321.6 321 54.8
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.4e-85 320.5 326 54.0
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.8e-85 320.1 323 54.8
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 3.9e-85 318.9 305 57.7
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 6.7e-85 318.2 318 54.7
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.5e-84 316.2 315 53.3
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.1e-82 308.9 323 53.9
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 6.9e-82 308.1 305 54.1
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.9e-80 302.8 316 51.6
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 6.5e-80 301.6 287 57.5
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.1e-79 300.8 325 52.6
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.1e-79 300.8 304 52.6
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 2.5e-79 299.7 312 53.2
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 4.2e-79 298.9 323 52.3
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 7.2e-79 298.1 323 51.1
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.2e-78 297.4 322 50.3
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.6e-78 297.0 323 50.5
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 7.9e-78 294.7 319 52.4
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 1.4e-77 293.9 324 50.6
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.4e-77 293.9 314 52.9
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.8e-77 293.5 324 50.9
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.8e-77 293.5 304 51.6
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 3.0e-77 292.7 314 51.9
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 8.8e-77 291.2 319 51.7
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.1e-76 290.8 310 52.6
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 3.3e-76 289.3 326 50.3
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 4.4e-76 288.9 311 51.8
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 4.4e-76 288.9 306 51.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.7e-76 288.5 311 51.4
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 7.4e-76 288.1 315 49.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 7.4e-76 288.1 337 47.8
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 7.4e-76 288.1 322 49.1
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 9.7e-76 287.7 344 47.4
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 9.7e-76 287.7 297 51.2
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.7e-75 287.0 315 48.9
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.2e-75 286.6 272 56.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.8e-75 286.2 315 50.8
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.2e-75 284.6 344 47.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.1e-74 284.3 315 50.2
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 7.0e-74 281.6 324 47.5
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 9.1e-74 281.2 309 50.8
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.5e-73 280.4 325 50.2
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.5e-73 280.4 324 49.1
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 2.0e-73 280.0 323 48.9
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.6e-73 279.6 315 49.8
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 2.9e-72 276.2 314 48.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.8e-72 275.8 314 48.7
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 3.8e-72 275.8 320 47.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.1e-71 274.2 315 48.9
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.6e-70 270.4 315 48.3
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.6e-70 270.4 322 49.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 8.8e-69 264.6 315 47.6
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.5e-68 263.8 231 58.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 9.7e-68 261.2 223 60.1
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 4.8e-67 258.8 314 45.9
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 4.8e-67 258.8 313 48.6
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 2.0e-65 253.4 324 44.1
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 6.5e-64 248.4 312 49.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.5e-63 246.5 321 46.1
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 4.2e-63 245.7 321 47.0
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 5.5e-63 245.4 352 44.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 7.2e-63 245.0 321 47.0
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.6e-62 243.8 321 47.0
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 6.3e-59 231.9 294 46.9
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 1.4e-58 230.7 301 45.5
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.4e-58 229.9 297 47.1
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.0e-57 226.9 297 46.8
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.3e-56 224.2 296 44.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 2.9e-56 223.0 209 54.1
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.8e-56 222.6 297 45.5
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 5.5e-55 218.8 302 43.7
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 3.6e-54 216.1 291 43.6
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 6.1e-54 215.3 306 41.5
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 8.0e-54 214.9 294 44.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 8.0e-54 214.9 294 44.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.3e-51 207.6 294 43.2
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.3e-51 207.6 294 43.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 3.7e-51 206.1 290 42.4
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.4e-50 204.1 146 66.4
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 9.1e-50 201.4 290 41.0
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.2e-49 201.1 237 45.6
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.6e-49 200.7 291 41.6
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 7.2e-47 191.8 305 39.7
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 7.2e-47 191.8 147 60.5
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.6e-39 165.6 150 57.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.4e-34 150.2 295 34.2
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.5e-28 131.0 231 35.1
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.7e-27 126.3 138 50.0
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.9e-26 124.0 124 54.0
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.2e-25 121.3 100 59.0
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.6e-22 110.9 168 42.9
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.0e-21 106.3 165 36.4
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 4.4e-20 102.8 150 46.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.7e-19 100.9 91 59.3
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.4e-12 76.6 78 57.7
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 5.8e-12 75.9 75 58.7
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 7.6e-12 75.5 132 39.4
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 4.9e-11 72.8 280 24.3
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 6.4e-11 72.4 225 26.7
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 2.4e-10 70.5 100 43.0


User provided reference genes

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