Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 4.8e-208 727.6 379 100.0
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 4.4e-68 262.7 272 60.7
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 4.2e-63 246.1 279 57.7
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 5.2e-53 212.6 260 55.8
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.6e-52 210.3 262 53.1
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 9.2e-50 201.8 260 54.6
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 6.0e-49 199.1 268 51.5
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 2.3e-48 197.2 295 48.8
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 6.6e-48 195.7 286 49.0
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 3.3e-47 193.4 264 51.5
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 4.7e-46 189.5 292 47.6
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 8.0e-46 188.7 293 49.8
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.2e-45 186.0 281 47.3
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 6.8e-45 185.7 259 51.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.5e-44 184.5 265 50.2
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.5e-44 184.5 270 50.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 4.4e-44 183.0 269 50.9
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 4.4e-44 183.0 269 50.9
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.8e-44 182.6 257 51.0
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 9.8e-44 181.8 269 50.2
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 1.3e-43 181.4 264 50.0
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.2e-43 180.6 291 46.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.2e-43 180.6 291 46.0
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 2.9e-43 180.3 293 45.7
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 3.7e-43 179.9 264 50.0
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 3.7e-43 179.9 272 48.9
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 4.9e-43 179.5 268 49.3
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 6.4e-43 179.1 289 47.4
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.1e-42 178.3 269 49.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.1e-42 178.3 269 48.3
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.4e-42 177.9 274 49.6
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 4.1e-42 176.4 263 49.4
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 5.4e-42 176.0 259 51.7
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.0e-40 171.8 240 52.9
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.7e-40 171.0 274 48.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.7e-40 171.0 271 47.6
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.7e-40 171.0 264 49.6
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 3.9e-40 169.9 294 46.3
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 5.1e-40 169.5 268 46.6
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 6.6e-40 169.1 264 48.5
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.1e-39 168.3 310 42.3
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.5e-39 167.9 275 45.5
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 2.5e-39 167.2 260 50.0
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 5.6e-39 166.0 268 48.5
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 6.2e-38 162.5 282 45.0
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.8e-37 161.0 274 45.6
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 2.3e-37 160.6 291 46.0
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 5.2e-37 159.5 265 44.9
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 5.2e-37 159.5 263 47.9
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 6.8e-37 159.1 264 45.5
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 8.9e-37 158.7 276 46.4
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.2e-36 158.3 264 45.1
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.5e-36 157.9 264 47.0
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 2.0e-36 157.5 272 46.0
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 4.4e-36 156.4 293 42.3
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 7.5e-36 155.6 263 46.4
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.2e-35 154.1 226 49.6
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.9e-35 153.7 274 44.5
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 3.7e-35 153.3 259 46.3
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 6.4e-35 152.5 270 44.8
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 8.3e-35 152.1 259 45.6
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 1.9e-34 151.0 259 45.6
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 2.4e-34 150.6 263 44.9
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 4.1e-34 149.8 253 44.3
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 7.1e-34 149.1 265 45.3
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 7.1e-34 149.1 265 45.3
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.2e-33 148.3 282 43.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.7e-33 147.1 265 44.9
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.7e-33 147.1 265 45.3
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 2.7e-33 147.1 293 42.3
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 1.0e-32 145.2 301 40.5
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.5e-31 140.6 261 42.5
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 5.6e-31 139.4 255 43.1
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 5.6e-31 139.4 288 41.3
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 6.2e-30 136.0 285 43.9
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 4.0e-29 133.3 209 46.9
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 9.9e-28 128.6 224 46.9
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 2.9e-27 127.1 262 42.7
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 3.8e-27 126.7 262 41.6
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.8e-27 126.7 257 42.0
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.4e-26 124.8 216 44.4
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 2.4e-26 124.0 264 39.4
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.2e-26 123.2 231 45.9
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 7.1e-26 122.5 291 37.8
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 9.2e-26 122.1 296 38.2
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.2e-25 121.7 284 41.9
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 1.2e-25 121.7 228 49.1
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.5e-25 120.2 272 36.8
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 2.3e-24 117.5 224 42.9
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 5.1e-24 116.3 257 39.7
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 6.6e-24 115.9 262 39.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 4.3e-23 113.2 257 39.3
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 5.6e-23 112.8 257 38.9
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.6e-23 112.8 257 39.3
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 2.1e-22 110.9 221 41.2
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 2.4e-21 107.5 247 42.5
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 4.0e-21 106.7 268 41.8
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 6.9e-21 105.9 310 34.2
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 9.0e-21 105.5 253 39.9
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 2.0e-20 104.4 265 36.6
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 3.8e-19 100.1 244 39.3
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.9e-18 97.8 210 41.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 4.2e-18 96.7 86 58.1
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 7.1e-18 95.9 233 39.5
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 3.5e-17 93.6 244 39.8
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.9e-16 90.1 229 38.0
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 1.1e-15 88.6 211 36.0
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 2.5e-15 87.4 134 48.5
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 2.1e-14 84.3 267 34.1
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.2e-11 74.3 218 40.4
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 4.9e-11 73.2 49 67.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 8.4e-11 72.4 47 68.1
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 2.4e-10 70.9 48 68.8
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 5.4e-10 69.7 48 66.7
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 5.4e-10 69.7 48 66.7
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 1.2e-09 68.6 41 73.2
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 1.2e-09 68.6 48 66.7
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.6e-09 68.2 54 55.6
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.6e-09 68.2 54 55.6
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 3.5e-09 67.0 38 76.3
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 4.6e-09 66.6 41 70.7
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 6.0e-09 66.2 42 69.0
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 1.0e-08 65.5 39 71.8
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 3.9e-08 63.5 37 75.7
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 6.7e-08 62.8 42 66.7
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.6e-07 59.7 150 42.7


User provided reference genes

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