Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 1.6e-173 612.8 346 100.0
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 2.1e-69 266.9 340 49.4
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 4.7e-61 239.2 346 45.1
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 1.1e-46 191.4 342 39.2
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 1.5e-46 191.0 339 37.2
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 3.3e-46 189.9 339 39.5
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 9.6e-46 188.3 392 36.2
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 4.9e-42 176.0 345 37.7
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 5.4e-41 172.6 342 35.1
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 3.5e-40 169.9 343 37.0
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 4.6e-40 169.5 343 36.2
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 1.3e-39 167.9 339 35.7
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 3.0e-39 166.8 342 35.4
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 6.7e-39 165.6 339 34.8
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 1.3e-37 161.4 343 33.8
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 4.8e-37 159.5 342 33.6
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 2.4e-36 157.1 345 33.9
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 3.1e-36 156.8 344 33.4
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 6.9e-36 155.6 339 33.0
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 1.5e-35 154.5 338 33.7
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 1.5e-35 154.5 324 35.8
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 4.5e-35 152.9 342 33.3
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 9.9e-35 151.8 347 32.3
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 1.7e-34 151.0 339 33.6
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 4.9e-34 149.4 343 32.4
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.1e-33 148.3 342 33.3
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 1.1e-33 148.3 341 31.4
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 1.4e-33 147.9 336 33.3
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.2e-33 146.7 346 31.8
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.2e-33 146.7 346 31.5
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 1.6e-32 144.4 346 31.8
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 1.6e-32 144.4 342 31.6
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 4.6e-32 142.9 342 31.6
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 4.6e-32 142.9 339 34.5
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 4.6e-32 142.9 323 32.8
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 6.0e-32 142.5 342 31.9
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 1.0e-31 141.7 337 32.0
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 6.7e-31 139.0 350 32.3
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 1.5e-30 137.9 339 32.7
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 1.9e-30 137.5 289 35.3
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 3.3e-30 136.7 381 29.9
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 4.3e-30 136.3 289 33.6
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 1.3e-29 134.8 275 36.0
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 2.1e-29 134.0 350 30.6
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 4.8e-29 132.9 300 31.7
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 1.1e-28 131.7 345 29.9
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 2.4e-28 130.6 356 29.8
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 2.4e-28 130.6 329 31.9
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 3.1e-28 130.2 331 31.7
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 5.3e-28 129.4 332 30.7
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 5.3e-28 129.4 345 30.4
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 6.9e-28 129.0 342 31.0
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 1.2e-27 128.3 338 30.8
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 2.0e-27 127.5 335 31.3
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 3.4e-27 126.7 343 31.8
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 1.3e-26 124.8 337 30.0
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 2.9e-26 123.6 343 31.5
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 3.8e-26 123.2 315 31.7
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 4.9e-26 122.9 343 32.1
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 1.9e-25 120.9 343 31.5
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 3.2e-25 120.2 341 30.2
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 5.5e-25 119.4 284 31.7
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 5.5e-25 119.4 144 46.5
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 9.3e-25 118.6 286 32.2
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 9.3e-25 118.6 345 30.1
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 1.2e-24 118.2 341 31.4
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 1.2e-24 118.2 290 31.0
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 1.6e-24 117.9 339 30.7
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 2.7e-24 117.1 146 46.6
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 6.0e-24 115.9 341 30.8
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 1.0e-23 115.2 341 30.8
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 1.0e-23 115.2 342 28.4
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 5.1e-23 112.8 341 30.8
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 1.5e-22 111.3 92 63.0
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 2.5e-22 110.5 372 28.5
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 2.5e-22 110.5 291 28.9
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 2.5e-22 110.5 357 28.0
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 5.7e-22 109.4 138 44.9
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.3e-21 108.2 316 29.1
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 2.8e-21 107.1 344 29.1
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 2.8e-21 107.1 293 29.0
ECA236G0829 Erigeron canadensis HOM05D000214 ORTHO05D000131 8.2e-21 105.5 73 76.7
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 1.8e-20 104.4 302 30.5
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 3.1e-20 103.6 361 29.4
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 6.9e-20 102.4 365 29.3
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 9.0e-20 102.1 223 33.2
ECA236G2006 Erigeron canadensis HOM05D000031 ORTHO05D008593 1.2e-19 101.7 102 59.8
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 2.0e-19 100.9 365 28.8
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 6.5e-18 95.9 93 52.7
ECA234G2168 Erigeron canadensis HOM05D000006 ORTHO05D008593 1.1e-17 95.1 77 66.2
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 1.9e-17 94.4 93 51.6
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 2.5e-17 94.0 241 29.5
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 4.2e-17 93.2 292 26.7
ECA247G0441 Erigeron canadensis HOM05D000031 ORTHO05D008593 5.5e-17 92.8 77 67.5
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 7.2e-17 92.4 312 29.5
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 2.1e-16 90.9 241 29.9
ECA234G4637 Erigeron canadensis HOM05D003321 ORTHO05D008593 2.7e-16 90.5 108 57.4
ECA233G6222 Erigeron canadensis HOM05D007803 ORTHO05D009814 6.1e-16 89.4 66 71.2
ECA232G1553 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.0e-14 84.3 146 44.5
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 9.7e-14 82.0 81 53.1
ECA233G1361 Erigeron canadensis HOM05D000031 ORTHO05D008593 4.8e-13 79.7 121 48.8
ECA234G2117 Erigeron canadensis HOM05D001046 ORTHO05D007174 1.8e-12 77.8 62 67.7
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 3.1e-12 77.0 144 39.6
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 1.2e-11 75.1 320 25.6
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 1.5e-11 74.7 141 36.2
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 5.9e-11 72.8 141 36.2
ECA236G5011 Erigeron canadensis HOM05D000181 ORTHO05D187405 5.0e-10 69.7 115 44.3
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 2.5e-09 67.4 145 35.9
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 4.2e-09 66.6 144 33.3
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 2.3e-07 60.8 83 37.3
ECA232G4600 Erigeron canadensis HOM05D000006 ORTHO05D008593 1.1e-06 58.5 58 67.2
Ca_05090_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 7.4e-06 55.8 87 37.9
Ca_14995_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 7.4e-06 55.8 87 37.9
ECA233G0685 Erigeron canadensis HOM05D000214 ORTHO05D000131 7.4e-06 55.8 59 59.3


User provided reference genes

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