Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 4.3e-93 344.7 184 100.0
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 9.2e-72 273.9 185 82.7
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 3.9e-70 268.5 181 80.1
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 7.6e-58 227.6 184 67.9
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 7.6e-58 227.6 163 71.2
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 1.7e-57 226.5 161 71.4
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 1.4e-56 223.4 183 66.7
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 4.2e-56 221.9 180 65.6
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 5.4e-56 221.5 183 64.5
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 9.3e-56 220.7 188 64.9
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 1.2e-55 220.3 182 66.5
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 1.6e-55 219.9 172 69.8
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 1.6e-55 219.9 184 66.3
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 2.7e-55 219.2 181 67.4
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 2.7e-55 219.2 177 65.0
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 3.5e-55 218.8 185 65.4
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 3.5e-55 218.8 176 66.5
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 4.6e-55 218.4 178 68.5
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 4.6e-55 218.4 177 67.2
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 6.0e-55 218.0 184 64.7
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 7.9e-55 217.6 187 65.2
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 1.0e-54 217.2 177 65.5
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.0e-54 217.2 175 68.0
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 1.0e-54 217.2 177 66.1
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 1.3e-54 216.9 167 68.3
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 1.3e-54 216.9 184 63.0
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 3.0e-54 215.7 186 66.1
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 6.6e-54 214.5 170 68.2
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 8.7e-54 214.2 162 67.9
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 1.1e-53 213.8 185 64.9
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 1.1e-53 213.8 175 65.7
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 1.1e-53 213.8 185 63.8
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 1.5e-53 213.4 162 68.5
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 1.5e-53 213.4 162 67.9
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.9e-53 213.0 175 65.7
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 2.5e-53 212.6 162 67.9
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 3.3e-53 212.2 174 66.1
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 1.3e-52 210.3 173 65.9
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 1.6e-52 209.9 165 67.9
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 2.1e-52 209.5 174 65.5
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 2.1e-52 209.5 170 67.1
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 2.8e-52 209.1 185 63.2
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 2.8e-52 209.1 178 62.4
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 3.6e-52 208.8 177 65.0
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 3.6e-52 208.8 178 64.0
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 3.6e-52 208.8 178 63.5
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 3.6e-52 208.8 183 63.9
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 4.8e-52 208.4 175 65.7
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 4.8e-52 208.4 185 63.8
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 6.2e-52 208.0 177 60.5
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 1.1e-51 207.2 170 65.9
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.4e-51 206.8 175 65.1
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 2.4e-51 206.1 154 70.1
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 2.4e-51 206.1 168 66.1
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 3.1e-51 205.7 176 62.5
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 3.1e-51 205.7 176 62.5
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 3.1e-51 205.7 193 59.6
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 4.0e-51 205.3 167 64.7
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 4.0e-51 205.3 170 65.9
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 4.0e-51 205.3 173 63.6
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 5.3e-51 204.9 185 60.5
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 6.9e-51 204.5 178 62.4
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 6.9e-51 204.5 177 62.7
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 6.9e-51 204.5 174 61.5
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 9.0e-51 204.1 193 60.1
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 1.2e-50 203.8 160 67.5
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 1.2e-50 203.8 174 62.6
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 1.2e-50 203.8 154 69.5
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 1.2e-50 203.8 154 69.5
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 1.2e-50 203.8 181 61.9
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 1.5e-50 203.4 174 62.1
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 1.5e-50 203.4 154 68.8
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 2.0e-50 203.0 173 65.3
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 2.6e-50 202.6 176 61.9
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 2.6e-50 202.6 176 61.9
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 2.6e-50 202.6 177 62.1
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 3.4e-50 202.2 167 66.5
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 3.4e-50 202.2 178 62.4
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 3.4e-50 202.2 185 55.7
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 4.5e-50 201.8 178 61.2
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 7.6e-50 201.1 176 61.4
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 7.6e-50 201.1 176 63.1
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 9.9e-50 200.7 174 62.1
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 9.9e-50 200.7 178 61.8
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 9.9e-50 200.7 178 61.8
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.3e-49 200.3 177 61.0
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 1.3e-49 200.3 176 60.8
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 1.3e-49 200.3 173 63.0
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 1.7e-49 199.9 177 59.3
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 1.7e-49 199.9 155 67.1
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 2.2e-49 199.5 170 62.9
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 4.9e-49 198.4 181 57.5
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 6.4e-49 198.0 177 59.9
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 8.4e-49 197.6 175 60.0
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.1e-48 197.2 177 59.3
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.4e-48 196.8 193 58.0
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 1.4e-48 196.8 193 58.0
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 1.9e-48 196.4 172 61.0
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 1.9e-48 196.4 154 66.2
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 3.2e-48 195.7 162 63.0
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 3.2e-48 195.7 162 63.0
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 3.2e-48 195.7 179 60.9
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 4.2e-48 195.3 172 62.8
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 4.2e-48 195.3 154 65.6
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 7.1e-48 194.5 210 55.2
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 7.1e-48 194.5 163 65.6
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 9.3e-48 194.1 160 68.8
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 1.2e-47 193.7 159 65.4
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.2e-47 193.7 167 61.7
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 1.6e-47 193.4 163 63.2
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 1.6e-47 193.4 161 64.0
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 1.6e-47 193.4 163 63.2
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 2.7e-47 192.6 182 60.4
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 2.7e-47 192.6 164 60.4
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 3.5e-47 192.2 176 59.1
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 6.0e-47 191.4 154 63.0
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 7.9e-47 191.0 229 52.0
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 1.0e-46 190.7 162 66.7
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 1.3e-46 190.3 167 62.9
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 1.3e-46 190.3 175 57.7
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 3.3e-45 185.7 162 63.0
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 4.3e-45 185.3 205 52.2
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 5.6e-45 184.9 168 61.3
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 4.8e-44 181.8 203 53.2
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 1.4e-43 180.3 156 63.5
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 4.5e-42 175.3 196 53.6
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 4.5e-42 175.3 156 57.7
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 1.7e-41 173.3 131 66.4
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 2.2e-41 172.9 156 55.8
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 4.9e-41 171.8 125 68.8
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 7.1e-40 167.9 130 69.2
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 1.2e-39 167.2 121 71.1
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 6.0e-39 164.9 128 64.8
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 7.9e-39 164.5 135 63.7
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 1.0e-38 164.1 123 68.3
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 2.3e-38 162.9 131 67.9
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 3.9e-38 162.2 157 52.2
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 5.1e-38 161.8 155 60.0
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 1.5e-37 160.2 124 66.9
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 3.3e-37 159.1 125 68.0
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 5.7e-37 158.3 157 54.1
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 6.2e-36 154.8 140 55.7
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 3.1e-35 152.5 150 55.3
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 1.2e-34 150.6 140 61.4
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 2.6e-34 149.4 126 65.9
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 1.3e-33 147.1 113 69.0
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 1.7e-33 146.7 119 63.0
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 2.2e-33 146.4 170 45.3
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 2.5e-32 142.9 171 43.3
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 2.5e-32 142.9 136 59.6
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 2.1e-31 139.8 151 49.0
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 2.3e-30 136.3 150 50.0
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 1.1e-29 134.0 118 61.0
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 4.8e-28 128.6 94 70.2
BcaB01g01455 Brassica carinata HOM05D004360 ORTHO05D005195 4.2e-24 115.5 90 65.6
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 2.0e-21 106.7 100 63.0
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 1.4e-19 100.5 103 54.4
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.2e-18 97.4 137 43.8
Pp3c14_12450 Physcomitrium patens HOM05D004360 ORTHO05D005195 1.6e-10 70.5 78 48.7
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 1.2e-07 60.8 47 66.0
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 2.1e-07 60.1 46 67.4
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 2.1e-07 60.1 46 67.4
TPR.G39583 Trifolium pratense HOM05D004360 ORTHO05D005195 4.7e-07 58.9 46 58.7
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 3.0e-06 56.2 46 63.0
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 6.7e-06 55.1 44 63.6


User provided reference genes

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