Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.4e-245 852.4 411 100.0
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 2.6e-138 496.1 276 83.7
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.1e-130 470.7 303 74.9
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 7.0e-112 408.3 275 71.6
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.8e-110 402.5 246 73.6
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.2e-108 397.5 273 68.1
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.8e-108 396.4 271 69.4
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.6e-108 396.0 263 71.9
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.8e-107 393.7 266 69.2
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.8e-107 393.7 284 65.5
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 3.0e-107 392.9 272 65.8
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.0e-107 392.5 266 68.4
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 6.8e-107 391.7 271 66.8
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 8.9e-107 391.3 271 66.1
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 8.9e-107 391.3 271 65.3
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.2e-106 391.0 265 67.5
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.3e-105 387.5 272 68.4
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.3e-105 387.5 265 69.1
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.7e-105 387.1 273 66.3
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 2.2e-105 386.7 262 68.3
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.7e-105 386.0 260 68.5
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.7e-105 386.0 261 68.2
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 6.4e-105 385.2 273 64.1
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.8e-104 383.6 247 72.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 2.4e-104 383.3 271 65.7
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.2e-104 382.9 249 69.9
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 3.2e-104 382.9 275 64.4
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 7.0e-104 381.7 249 70.7
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 9.2e-104 381.3 258 68.6
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 9.2e-104 381.3 273 66.3
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.2e-103 380.9 261 66.7
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.0e-103 380.2 258 69.0
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 2.7e-103 379.8 274 64.6
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 2.7e-103 379.8 271 64.6
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.7e-103 379.8 313 58.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 3.5e-103 379.4 278 65.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.5e-103 379.4 263 66.2
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.9e-103 378.6 268 65.3
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 5.9e-103 378.6 273 65.6
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.7e-102 377.1 259 68.0
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.7e-102 377.1 268 65.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.3e-102 376.7 274 63.9
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 6.6e-102 375.2 270 63.0
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.5e-101 374.0 273 63.0
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.9e-101 373.6 263 66.9
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 2.5e-101 373.2 270 64.8
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.5e-101 373.2 258 67.4
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 2.5e-101 373.2 264 66.3
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 2.5e-101 373.2 274 64.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 7.3e-101 371.7 263 64.6
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 9.5e-101 371.3 277 66.1
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.2e-100 370.9 264 67.0
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 6.2e-100 368.6 251 65.3
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.8e-99 367.1 253 66.0
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 5.2e-99 365.5 278 62.2
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 5.2e-99 365.5 238 70.2
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 6.8e-99 365.2 257 67.3
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 6.8e-99 365.2 273 64.8
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.5e-98 364.0 257 66.5
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.6e-98 363.2 277 61.0
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 2.6e-98 363.2 225 70.2
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 2.6e-98 363.2 238 67.6
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.3e-97 360.9 266 63.5
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 1.7e-97 360.5 267 63.3
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 6.4e-97 358.6 255 66.3
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 6.4e-97 358.6 253 64.4
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 8.3e-97 358.2 269 63.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.4e-96 357.5 248 66.5
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.4e-96 357.5 256 64.5
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 4.1e-96 355.9 250 65.6
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 5.4e-96 355.5 269 63.2
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 7.0e-96 355.1 249 64.7
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 9.2e-96 354.8 247 66.4
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.2e-95 354.4 269 63.2
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.2e-95 354.4 268 63.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 3.5e-95 352.8 278 60.4
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.0e-94 351.3 268 61.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-94 351.3 268 60.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.7e-94 350.5 268 61.6
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 3.0e-94 349.7 257 63.0
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.9e-94 349.4 268 61.2
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 8.6e-94 348.2 270 60.4
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.5e-93 347.4 268 60.8
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.5e-93 347.4 268 60.8
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.9e-93 347.1 205 72.7
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.5e-93 346.7 268 61.2
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 3.3e-93 346.3 244 66.0
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 7.3e-93 345.1 269 61.7
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 7.3e-93 345.1 270 60.7
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.3e-93 345.1 225 68.0
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.5e-93 344.7 290 57.6
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.2e-92 344.4 268 59.7
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.6e-92 344.0 217 68.7
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 2.1e-92 343.6 269 61.3
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.1e-92 343.6 269 62.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 4.7e-92 342.4 206 71.8
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 6.2e-92 342.0 270 59.3
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.5e-90 337.4 191 74.3
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.3e-89 334.3 287 56.1
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 2.9e-89 333.2 258 61.2
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 7.3e-85 318.5 275 57.5
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 2.3e-83 313.5 216 63.4
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.6e-82 310.1 205 66.3
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 8.4e-81 305.1 226 63.3
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.2e-76 291.2 271 51.3
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.2e-73 280.4 201 65.7
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 8.4e-73 278.5 235 54.0
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 5.4e-72 275.8 196 64.8
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 2.3e-70 270.4 266 49.6
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 6.6e-70 268.9 197 59.9
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-68 264.6 203 60.6
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.8e-68 262.7 288 45.5
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.2e-64 249.6 146 77.4
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 3.5e-63 246.5 198 53.0
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 5.8e-58 229.2 190 56.3
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.9e-57 226.1 216 48.6
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 2.3e-54 217.2 177 56.5
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 4.3e-45 186.4 154 60.4
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.1e-43 181.8 257 40.5
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.4e-43 180.6 110 69.1
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 2.5e-37 160.6 142 57.0
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 5.3e-27 126.3 148 48.0
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 9.4e-24 115.5 83 61.4
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 2.0e-13 81.3 54 63.0
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 9.1e-11 72.4 37 81.1


User provided reference genes

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