Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.7e-85 319.3 163 100.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 5.0e-53 211.5 158 72.2
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.0e-50 203.8 167 67.1
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 5.2e-50 201.4 155 67.7
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 2.0e-49 199.5 155 67.1
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 2.6e-49 199.1 160 61.9
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 9.7e-49 197.2 158 64.6
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-47 193.4 167 63.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.2e-45 186.0 155 61.9
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 3.2e-44 182.2 155 61.9
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 4.2e-44 181.8 155 64.5
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 5.5e-44 181.4 153 60.8
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 7.2e-44 181.0 155 61.3
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.1e-43 179.5 155 60.6
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 2.1e-43 179.5 153 62.1
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.7e-43 178.3 157 59.9
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.4e-42 176.8 149 59.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.4e-42 176.8 163 58.9
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 5.2e-42 174.9 160 58.1
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 8.8e-42 174.1 155 58.1
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.5e-41 173.3 153 56.2
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.6e-41 172.6 155 58.1
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 2.6e-41 172.6 157 58.6
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.6e-41 172.6 154 58.4
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 3.4e-41 172.2 162 58.0
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 3.4e-41 172.2 160 55.6
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 4.4e-41 171.8 155 56.8
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.7e-41 171.4 152 57.2
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 9.7e-41 170.6 147 57.8
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.3e-40 170.2 150 58.7
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.8e-40 169.1 150 58.0
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.8e-40 169.1 170 53.5
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 3.7e-40 168.7 155 58.1
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 8.3e-40 167.5 152 55.3
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 8.3e-40 167.5 150 56.7
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.4e-39 166.8 157 56.7
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 1.4e-39 166.8 164 56.1
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.8e-39 166.4 156 58.3
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.4e-39 166.0 151 58.3
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.2e-38 163.7 132 64.4
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.0e-38 162.9 145 56.6
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 3.5e-38 162.2 165 58.2
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 3.5e-38 162.2 162 53.7
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 2.5e-36 156.0 145 54.5
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.5e-36 156.0 158 52.5
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.2e-36 155.6 155 55.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 3.2e-36 155.6 150 52.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 4.2e-36 155.2 158 53.2
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.1e-35 152.9 154 54.5
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.7e-35 152.5 151 55.0
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 3.6e-35 152.1 158 53.2
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 8.0e-35 151.0 150 56.7
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 8.0e-35 151.0 153 54.9
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.4e-34 150.2 152 53.9
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.8e-34 149.8 155 54.8
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.3e-34 149.4 152 54.6
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 3.0e-34 149.1 151 57.0
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 5.2e-34 148.3 152 55.3
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.2e-33 147.1 152 52.6
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.5e-33 146.7 149 53.0
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 2.0e-33 146.4 143 55.9
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.0e-33 146.4 149 52.3
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 4.4e-33 145.2 153 51.6
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.4e-33 145.2 157 51.0
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.3e-32 143.7 142 55.6
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.7e-32 143.3 154 51.3
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.7e-32 143.3 137 54.7
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.7e-32 143.3 157 52.9
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.8e-32 142.5 157 49.7
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.8e-32 142.5 157 49.7
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 2.8e-32 142.5 153 49.7
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 8.3e-32 141.0 157 49.0
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 8.3e-32 141.0 181 47.5
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.1e-31 140.6 152 49.3
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.8e-31 139.8 152 48.0
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 2.4e-31 139.4 153 49.7
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 3.1e-31 139.0 161 44.1
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 4.1e-31 138.7 147 49.7
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.1e-31 138.7 143 53.1
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 5.4e-31 138.3 159 50.3
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 1.6e-30 136.7 145 52.4
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.6e-30 136.7 147 52.4
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.6e-30 136.7 155 45.8
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.6e-30 136.7 154 50.0
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 2.0e-30 136.3 151 49.7
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.7e-30 136.0 144 52.1
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.5e-30 135.6 147 50.3
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 4.5e-30 135.2 152 50.7
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 4.5e-30 135.2 141 53.2
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 5.9e-30 134.8 175 44.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.3e-29 133.7 150 49.3
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.7e-29 133.3 141 51.1
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 3.8e-29 132.1 144 50.0
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 8.6e-29 131.0 151 48.3
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 1.9e-28 129.8 132 53.0
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 2.5e-28 129.4 157 45.9
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.3e-28 129.0 160 49.4
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 7.2e-28 127.9 151 48.3
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 9.5e-28 127.5 161 48.4
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.1e-27 126.3 147 44.2
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.4e-26 123.6 140 45.0
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.3e-26 122.9 147 44.2
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 3.0e-26 122.5 131 45.8
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 4.0e-26 122.1 147 44.2
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 5.2e-26 121.7 147 44.2
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.0e-25 119.8 151 43.0
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 2.0e-25 119.8 143 46.2
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.0e-25 119.8 156 43.6
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.4e-25 119.0 161 44.7
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 4.4e-25 118.6 147 44.2
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.5e-25 117.9 154 44.2
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.7e-24 116.7 149 44.3
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.7e-24 116.7 147 42.2
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 2.2e-24 116.3 151 41.7
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 2.2e-24 116.3 149 43.6
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 6.3e-24 114.8 147 41.5
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 6.3e-24 114.8 151 41.1
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 6.3e-24 114.8 140 45.7
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 8.3e-24 114.4 154 40.9
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 2.4e-23 112.8 146 46.6
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 5.4e-23 111.7 133 45.9
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-22 110.5 149 40.9
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.2e-22 110.5 144 45.1
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 2.0e-22 109.8 149 40.3
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 2.0e-22 109.8 149 40.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.0e-21 107.5 150 39.3
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.0e-21 107.5 150 39.3
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 2.3e-21 106.3 123 43.9
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 9.5e-20 100.9 147 40.8
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.2e-19 100.5 142 41.5
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 1.2e-19 100.5 159 38.4
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 2.1e-19 99.8 143 43.4
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 2.8e-19 99.4 143 39.9
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.6e-19 99.0 104 49.0
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 4.7e-19 98.6 148 41.2
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.4e-18 97.1 94 56.4
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 2.3e-18 96.3 162 37.7
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.8e-18 94.7 75 62.7
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.8e-18 94.7 75 62.7
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 6.8e-18 94.7 143 42.0
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 6.8e-18 94.7 143 38.5
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.6e-17 92.8 76 63.2
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 5.8e-17 91.7 154 37.0
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 1.7e-16 90.1 158 37.3
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.4e-15 86.3 125 42.4
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.4e-15 86.3 125 42.4
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.5e-14 82.4 125 41.6
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.5e-14 82.4 125 41.6
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 4.6e-14 82.0 127 39.4
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.8e-14 81.3 141 39.0
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 3.0e-13 79.3 142 42.3
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 5.0e-13 78.6 91 48.4
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 6.6e-13 78.2 105 43.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.6e-11 73.6 142 31.0
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.1e-11 73.2 86 47.7
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 8.0e-11 71.2 86 45.3
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 2.3e-10 69.7 69 50.7
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 4.0e-10 68.9 70 48.6
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 7.5e-09 64.7 155 31.6
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 3.7e-08 62.4 70 47.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 1.4e-07 60.5 59 49.2
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.1e-07 58.2 74 40.5
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.7e-06 56.2 60 48.3
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 2.7e-06 56.2 129 32.6
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 2.7e-06 56.2 48 52.1
DCAR_023394 Daucus carota HOM05D005582 ORTHO05D175182 3.5e-06 55.8 138 31.2
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.6e-06 55.5 59 47.5
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.6e-06 55.5 59 47.5


User provided reference genes

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