Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.9e-96 355.1 169 100.0
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.9e-84 315.8 169 89.3
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 6.5e-80 300.8 169 82.2
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 8.5e-80 300.4 167 82.0
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.8e-77 292.7 169 80.5
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 8.8e-77 290.4 165 81.8
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 5.7e-76 287.7 167 76.0
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 9.7e-76 287.0 169 78.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.2e-75 285.8 167 77.2
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.1e-74 283.5 167 75.4
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 5.3e-74 281.2 165 78.2
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.5e-73 279.6 168 78.6
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 2.0e-73 279.3 163 78.5
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 4.5e-73 278.1 169 76.3
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 4.5e-73 278.1 166 77.7
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 4.5e-73 278.1 163 77.3
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 7.7e-73 277.3 169 74.6
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.9e-72 275.4 165 75.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 5.0e-72 274.6 166 75.3
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.5e-72 273.9 169 76.9
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.5e-72 273.9 169 76.9
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.1e-71 273.5 166 76.5
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 3.2e-71 271.9 167 75.4
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 4.2e-71 271.6 168 74.4
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 4.2e-71 271.6 169 73.4
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 5.5e-71 271.2 168 75.0
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 9.4e-71 270.4 168 73.8
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.7e-70 268.9 166 74.7
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 7.9e-70 267.3 166 74.1
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.0e-69 266.9 169 71.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.0e-69 266.9 169 70.4
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.0e-69 266.9 169 70.4
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.0e-69 266.9 168 72.6
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.0e-69 266.9 166 74.1
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.4e-69 266.5 162 73.5
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 5.1e-69 264.6 169 72.2
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 6.7e-69 264.2 168 70.8
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 6.7e-69 264.2 166 73.5
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.8e-69 263.8 168 72.6
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 8.8e-69 263.8 166 74.1
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.1e-68 263.5 166 71.1
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.1e-68 263.5 166 69.9
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 2.0e-68 262.7 166 74.1
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 2.6e-68 262.3 161 75.2
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 3.3e-68 261.9 167 73.1
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 3.3e-68 261.9 167 73.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.3e-68 261.9 166 68.7
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.3e-67 260.0 168 71.4
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.7e-67 259.6 166 71.7
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 2.8e-67 258.8 170 68.8
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 2.8e-67 258.8 171 71.3
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 4.8e-67 258.1 166 71.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.8e-67 258.1 169 72.2
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 8.2e-67 257.3 167 72.5
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.1e-66 256.9 167 71.3
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.1e-66 256.9 168 72.0
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.1e-66 256.9 169 71.0
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 4.1e-66 255.0 166 69.3
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 7.0e-66 254.2 169 70.4
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.5e-65 253.1 165 69.7
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 2.0e-65 252.7 164 68.9
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.0e-65 252.7 165 69.7
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 2.6e-65 252.3 164 68.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 5.9e-65 251.1 169 69.8
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 5.9e-65 251.1 169 69.8
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 7.7e-65 250.8 167 70.1
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.7e-64 249.6 166 68.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 2.2e-64 249.2 160 71.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.9e-64 248.8 169 69.2
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.2e-63 245.4 171 69.6
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 4.2e-63 245.0 170 69.4
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 9.4e-63 243.8 162 70.4
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 2.1e-62 242.7 165 68.5
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.7e-62 242.3 165 69.1
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.6e-62 241.9 164 68.3
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 3.6e-62 241.9 160 69.4
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 3.6e-62 241.9 165 67.9
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.4e-61 240.0 164 66.5
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.8e-61 239.6 164 66.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 2.3e-61 239.2 164 67.1
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 2.3e-61 239.2 161 67.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 7.4e-60 234.2 159 66.0
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.8e-59 232.3 167 65.3
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.1e-58 230.3 160 70.0
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.7e-56 223.0 146 71.9
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.9e-56 222.2 143 71.3
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 5.5e-55 218.0 166 65.1
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.4e-53 213.4 140 68.6
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.2e-52 210.3 140 67.9
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.4e-52 208.4 121 75.2
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 8.3e-51 204.1 165 59.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 8.3e-51 204.1 175 58.9
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 9.1e-50 200.7 168 61.3
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.6e-49 199.9 167 59.3
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 1.7e-48 196.4 129 71.3
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 5.0e-48 194.9 141 64.5
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.1e-47 193.7 167 57.5
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.9e-47 193.0 161 54.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 9.4e-47 190.7 168 57.7
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.0e-45 187.2 168 56.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 8.8e-45 184.1 174 54.6
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.6e-44 182.6 170 57.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.4e-44 182.2 118 67.8
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 8.3e-43 177.6 165 50.3
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.0e-40 170.6 156 55.8
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.9e-39 166.4 161 49.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.9e-39 166.4 165 49.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 4.2e-39 165.2 175 51.4
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.8e-38 162.5 166 44.6
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.6e-33 146.7 143 51.0
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.5e-31 140.2 85 75.3
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.3e-31 138.7 160 45.6
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.8e-30 136.0 89 74.2
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.8e-29 133.3 167 45.5
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.3e-27 127.1 110 58.2
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 3.3e-23 112.5 131 48.1
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.1e-21 105.9 153 43.1
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 7.8e-17 91.3 96 51.0
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.3e-13 79.7 44 77.3
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 2.4e-10 69.7 121 36.4


User provided reference genes

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