Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 3.9e-128 461.5 230 100.0
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 2.2e-99 365.9 231 81.4
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 2.7e-97 359.0 231 81.0
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 2.9e-91 339.0 228 75.4
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 5.5e-90 334.7 228 73.2
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 2.7e-89 332.4 231 73.2
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 5.2e-88 328.2 230 72.2
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 6.7e-88 327.8 230 73.9
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 1.5e-87 326.6 229 69.4
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 3.3e-87 325.5 230 71.7
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 9.7e-87 323.9 230 71.7
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 1.3e-86 323.6 227 69.6
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 1.3e-86 323.6 227 70.9
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 1.3e-86 323.6 229 68.6
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 3.7e-86 322.0 227 70.5
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 4.8e-86 321.6 229 68.6
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 6.3e-86 321.2 229 69.0
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 8.2e-86 320.9 229 70.3
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 1.1e-85 320.5 227 69.2
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 1.1e-85 320.5 229 68.1
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 1.1e-85 320.5 229 68.6
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 1.8e-85 319.7 229 69.4
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 4.1e-85 318.5 228 69.7
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 1.2e-84 317.0 229 68.6
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 2.0e-84 316.2 227 70.0
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 2.0e-84 316.2 228 67.5
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 2.6e-84 315.8 236 69.1
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 2.6e-84 315.8 229 67.2
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 3.5e-84 315.5 231 68.4
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.5e-84 315.1 229 69.9
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 5.9e-84 314.7 229 69.4
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 7.7e-84 314.3 229 69.4
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 7.7e-84 314.3 232 66.8
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 1.0e-83 313.9 229 69.4
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.3e-83 313.5 227 69.2
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.7e-83 313.2 228 68.9
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 1.7e-83 313.2 227 67.4
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 2.2e-83 312.8 231 68.0
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 2.9e-83 312.4 229 68.6
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 2.9e-83 312.4 227 67.4
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 5.0e-83 311.6 227 68.7
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 5.0e-83 311.6 217 68.7
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 5.0e-83 311.6 225 66.7
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 8.5e-83 310.8 229 68.6
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 8.5e-83 310.8 229 65.9
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 8.5e-83 310.8 229 66.8
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 8.5e-83 310.8 229 66.8
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 1.1e-82 310.5 227 67.8
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 1.5e-82 310.1 228 67.5
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 1.9e-82 309.7 229 67.7
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.9e-82 309.7 229 66.8
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.9e-82 309.7 229 66.8
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 2.5e-82 309.3 227 67.8
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 2.5e-82 309.3 227 67.0
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 4.2e-82 308.5 229 66.4
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 7.2e-82 307.8 229 68.1
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 1.6e-81 306.6 231 64.9
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 2.1e-81 306.2 229 67.2
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 3.6e-81 305.4 229 66.4
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 3.6e-81 305.4 230 66.1
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 6.1e-81 304.7 227 67.0
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 6.1e-81 304.7 229 65.9
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 6.1e-81 304.7 192 74.5
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 6.1e-81 304.7 226 65.9
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 1.0e-80 303.9 229 67.7
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.8e-80 303.1 229 66.8
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 2.3e-80 302.8 229 66.4
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 3.0e-80 302.4 215 69.3
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 5.2e-80 301.6 230 66.1
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 6.7e-80 301.2 229 65.5
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 8.8e-80 300.8 227 64.3
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 8.8e-80 300.8 229 66.4
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 1.2e-79 300.4 230 66.1
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 1.5e-79 300.1 229 63.8
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 2.0e-79 299.7 229 65.5
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 2.0e-79 299.7 227 65.6
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 2.0e-79 299.7 227 64.8
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 2.6e-79 299.3 228 65.4
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.6e-79 299.3 203 72.9
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 2.6e-79 299.3 215 65.6
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 3.3e-79 298.9 229 65.1
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 5.7e-79 298.1 227 66.5
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 7.5e-79 297.7 230 65.7
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 9.7e-79 297.4 227 64.8
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 1.3e-78 297.0 227 64.8
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 1.3e-78 297.0 203 72.4
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 1.7e-78 296.6 229 65.1
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 2.8e-78 295.8 227 64.8
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 2.8e-78 295.8 227 65.6
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 2.8e-78 295.8 227 65.6
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.8e-78 295.8 197 73.6
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.8e-78 295.8 229 63.3
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 3.7e-78 295.4 310 54.5
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 4.8e-78 295.0 229 63.8
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 4.8e-78 295.0 229 63.8
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 4.8e-78 295.0 228 62.7
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 8.2e-78 294.3 229 65.1
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 2.4e-77 292.7 230 64.3
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 4.1e-77 292.0 232 60.3
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 9.1e-77 290.8 229 61.6
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 2.0e-76 289.7 217 65.4
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 2.0e-76 289.7 229 63.3
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 3.5e-76 288.9 253 59.7
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 3.5e-76 288.9 229 62.9
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 2.2e-75 286.2 227 64.3
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 2.2e-75 286.2 232 60.8
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 2.2e-75 286.2 232 60.8
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 3.8e-75 285.4 226 60.2
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 9.4e-74 280.8 226 61.9
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 2.3e-72 276.2 330 48.5
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 2.3e-72 276.2 225 59.1
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 3.0e-72 275.8 219 59.8
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 6.8e-72 274.6 230 60.9
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 8.8e-72 274.2 219 60.3
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 1.2e-71 273.9 229 64.2
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 5.7e-71 271.6 230 60.0
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 8.3e-70 267.7 229 62.9
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 1.1e-69 267.3 230 58.3
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 9.1e-69 264.2 228 57.9
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.5e-66 256.9 219 56.6
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 1.6e-65 253.4 361 42.4
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 8.0e-65 251.1 153 78.4
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 1.5e-63 246.9 153 76.5
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 1.3e-62 243.8 229 54.1
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 1.4e-61 240.4 152 75.7
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 2.4e-61 239.6 186 67.7
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 3.5e-60 235.7 180 66.1
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 9.5e-58 227.6 152 72.4
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 2.1e-49 199.9 130 72.3
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 2.1e-49 199.9 123 78.9
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 4.4e-47 192.2 191 52.4
CSS0002150 Camellia sinensis var. sinensis HOM05D004698 ORTHO05D005699 1.3e-46 190.7 107 84.1
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 2.9e-46 189.5 146 67.1
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 3.7e-46 189.1 175 55.4
A02p05700 Brassica napus HOM05D004698 ORTHO05D005699 1.7e-43 180.3 111 77.5
BraA02t05522Z Brassica rapa HOM05D004698 ORTHO05D005699 1.7e-43 180.3 111 77.5
Cpa.g.sc117.1 Carica papaya HOM05D004698 ORTHO05D005699 1.4e-40 170.6 99 79.8
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 1.2e-39 167.5 228 42.5
MD03G1017600 Malus domestica HOM05D004698 ORTHO05D005699 7.1e-37 158.3 109 71.6
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 2.8e-33 146.4 190 39.5
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 1.8e-32 143.7 122 58.2
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 7.6e-31 138.3 121 58.7
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 7.6e-31 138.3 121 57.9
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 1.2e-28 131.0 84 72.6
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 6.0e-28 128.6 123 53.7
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 4.0e-24 115.9 147 44.2
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 4.4e-23 112.5 81 67.9
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 8.4e-22 108.2 148 41.2
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 1.4e-16 90.9 134 40.3
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 1.7e-14 84.0 57 68.4
MD03G1017500 Malus domestica HOM05D004698 ORTHO05D005699 2.3e-11 73.6 47 70.2
PRCOL_00002610 Prasinoderma coloniale HOM05D004698 ORTHO05D333686 4.3e-10 69.3 148 34.5
MD13G1112600 Malus domestica HOM05D000829 ORTHO05D000690 5.3e-08 62.4 48 60.4
Potri.006G191700 Populus trichocarpa HOM05D004698 ORTHO05D005699 3.4e-07 59.7 67 43.3


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