Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 8.2e-114 414.1 265 100.0
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 5.1e-63 245.4 160 83.1
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 4.8e-53 212.2 133 84.2
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 3.1e-44 183.0 142 69.0
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.5e-43 180.6 137 69.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 7.6e-43 178.3 126 72.2
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.3e-42 177.6 126 72.2
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 6.4e-42 175.3 151 65.6
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.9e-41 173.7 154 62.3
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 4.2e-41 172.6 144 68.8
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 4.2e-41 172.6 144 68.8
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 4.2e-41 172.6 144 68.8
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 7.1e-41 171.8 162 62.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.1e-41 171.8 131 71.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.3e-39 167.5 135 66.7
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 2.3e-39 166.8 136 67.6
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 3.9e-39 166.0 118 73.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 5.1e-39 165.6 111 75.7
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-38 164.5 130 67.7
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.5e-38 164.1 130 67.7
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-38 164.1 130 67.7
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.9e-38 163.7 130 67.7
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.5e-38 163.3 150 64.7
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 3.3e-38 162.9 137 62.8
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 4.3e-38 162.5 135 63.0
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 4.3e-38 162.5 127 66.9
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.6e-38 161.4 129 67.4
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.3e-37 161.0 160 58.8
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 2.1e-37 160.2 152 61.8
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 3.7e-37 159.5 140 65.0
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 3.7e-37 159.5 115 70.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.8e-37 159.1 118 69.5
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 6.2e-37 158.7 137 65.0
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 8.1e-37 158.3 144 63.2
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.1e-36 157.9 114 71.1
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.1e-36 157.9 124 65.3
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.1e-36 157.9 118 70.3
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.8e-36 157.1 124 65.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.8e-36 157.1 124 65.3
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.1e-36 156.4 110 72.7
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 4.0e-36 156.0 134 64.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 4.0e-36 156.0 124 65.3
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 5.3e-36 155.6 137 61.3
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 9.0e-36 154.8 149 60.4
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 9.0e-36 154.8 117 66.7
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 9.0e-36 154.8 113 69.9
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 9.0e-36 154.8 101 80.2
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.2e-35 154.5 131 63.4
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.5e-35 154.1 146 58.9
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.6e-35 153.3 118 65.3
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 3.4e-35 152.9 135 60.0
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.5e-35 152.5 104 75.0
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 4.5e-35 152.5 124 63.7
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 5.8e-35 152.1 114 65.8
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.8e-35 152.1 150 64.0
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 7.6e-35 151.8 145 60.0
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 7.6e-35 151.8 106 72.6
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.0e-34 151.4 144 59.7
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.0e-34 151.4 129 63.6
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 1.0e-34 151.4 124 62.9
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.0e-34 151.4 154 54.5
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.3e-34 151.0 115 67.8
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.3e-34 151.0 129 62.8
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.2e-34 150.2 130 64.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 3.8e-34 149.4 128 62.5
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 6.5e-34 148.7 129 63.6
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 8.4e-34 148.3 147 57.1
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.4e-33 147.5 136 56.6
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.9e-33 147.1 124 59.7
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.9e-33 147.1 151 53.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.2e-33 146.4 106 69.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 5.5e-33 145.6 127 59.8
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 9.3e-33 144.8 144 55.6
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 6.0e-32 142.1 136 56.6
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.0e-31 141.4 141 52.5
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.3e-31 141.0 105 67.6
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.8e-31 140.6 142 57.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 2.3e-31 140.2 154 52.6
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.3e-31 140.2 151 54.3
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.0e-31 139.8 168 48.2
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 5.1e-31 139.0 143 51.7
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 5.1e-31 139.0 151 53.6
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.5e-30 137.5 161 50.9
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.9e-30 137.1 135 55.6
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.3e-30 136.3 153 50.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 3.3e-30 136.3 153 50.3
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 3.3e-30 136.3 109 65.1
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 7.4e-30 135.2 130 56.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 7.4e-30 135.2 122 59.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 7.4e-30 135.2 145 52.4
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 7.4e-30 135.2 145 52.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.8e-29 133.3 139 56.8
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.7e-29 132.9 104 67.3
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.1e-28 131.3 114 60.5
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.1e-28 131.3 114 60.5
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 3.1e-28 129.8 112 61.6
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-28 129.8 112 61.6
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 3.1e-28 129.8 112 61.6
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.1e-28 129.8 102 66.7
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.2e-27 127.9 111 58.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.3e-26 124.4 109 60.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.4e-25 120.9 101 62.4
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.9e-22 110.5 192 43.2
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.4e-20 104.4 117 47.0
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.4e-20 103.6 149 47.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.6e-19 100.1 80 62.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 2.6e-19 100.1 79 63.3
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.7e-18 97.4 78 62.8
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.9e-18 96.7 94 51.1
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.4e-17 94.4 152 39.5
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 5.5e-17 92.4 107 46.7
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-16 91.3 59 74.6
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-16 91.3 59 74.6
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.0e-15 88.2 59 71.2
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.3e-14 83.2 54 72.2
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 5.7e-14 82.4 60 71.7
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.8e-12 77.4 74 59.5
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 1.3e-10 71.2 59 64.4
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.4e-07 61.2 50 64.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.0e-07 60.1 83 39.8
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 2.0e-06 57.4 50 62.0


User provided reference genes

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