Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.2e-118 427.6 303 100.0
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.4e-45 185.7 182 67.0
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.7e-25 119.8 265 31.3
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 3.7e-25 119.8 263 40.7
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 1.4e-24 117.9 263 57.8
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 1.0e-22 111.7 181 36.5
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 2.9e-22 110.2 205 43.4
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 5.0e-22 109.4 179 35.2
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 2.1e-20 104.0 177 46.3
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 1.9e-18 97.4 116 43.1
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-18 97.1 116 42.2
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 3.3e-18 96.7 160 33.8
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 9.7e-18 95.1 179 30.7
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.7e-17 94.4 264 48.5
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 2.2e-17 94.0 176 43.2
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 3.1e-16 90.1 157 48.4
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.5e-15 86.3 119 40.3
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 5.9e-15 85.9 107 43.0
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.3e-14 84.7 175 45.1
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 1.7e-14 84.3 103 40.8
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 2.2e-14 84.0 159 52.2
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.9e-14 83.6 118 37.3
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 2.9e-14 83.6 124 36.3
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.8e-14 83.2 157 45.9
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.5e-14 82.4 173 49.1
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 8.5e-14 82.0 117 35.9
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.1e-13 81.6 147 38.8
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-13 81.3 170 47.1
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 2.5e-13 80.5 182 28.6
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 3.2e-13 80.1 176 43.2
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 5.5e-13 79.3 100 40.0
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 9.4e-13 78.6 104 42.3
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 1.2e-12 78.2 118 35.6
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 1.6e-12 77.8 120 55.0
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.7e-12 77.0 159 34.6
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 2.7e-12 77.0 157 43.3
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 3.6e-12 76.6 157 42.0
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 1.0e-11 75.1 178 37.1
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-11 73.2 123 37.4
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 2.6e-10 70.5 262 45.4
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 3.3e-10 70.1 87 42.5
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.3e-10 70.1 113 38.1
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 3.3e-10 70.1 82 45.1
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 7.4e-10 68.9 91 41.8
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 9.7e-10 68.6 249 46.6
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 9.7e-10 68.6 249 46.6
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 1.7e-09 67.8 184 42.4
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-09 67.4 199 36.7
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 2.8e-09 67.0 266 41.0
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 4.8e-09 66.2 180 43.9
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 6.3e-09 65.9 101 38.6
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 6.3e-09 65.9 92 38.0
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 1.1e-08 65.1 89 39.3
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 1.4e-08 64.7 93 37.6
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 2.4e-08 63.9 85 40.0
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 2.4e-08 63.9 89 40.4
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 3.1e-08 63.5 91 41.8
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 4.1e-08 63.2 89 38.2
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 5.3e-08 62.8 88 38.6
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 5.3e-08 62.8 90 38.9
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 7.0e-08 62.4 89 41.6
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 7.0e-08 62.4 174 44.3
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 7.0e-08 62.4 85 38.8
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 1.5e-07 61.2 67 46.3
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 1.5e-07 61.2 85 41.2
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 1.5e-07 61.2 85 41.2
Eucgr.H00682 Eucalyptus grandis HOM05D005998 ORTHO05D007664 3.4e-07 60.1 48 50.0
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 4.5e-07 59.7 172 40.1
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 4.5e-07 59.7 87 37.9
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 5.9e-07 59.3 67 44.8
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 7.7e-07 58.9 65 47.7
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 7.7e-07 58.9 94 38.3
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 7.7e-07 58.9 91 38.5
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 1.0e-06 58.5 88 37.5
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.0e-06 58.5 174 41.4
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-06 58.2 115 34.8
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 2.2e-06 57.4 179 31.3
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 2.2e-06 57.4 87 34.5
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 2.2e-06 57.4 89 40.4
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 2.9e-06 57.0 175 39.4
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 3.8e-06 56.6 67 44.8
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 5.0e-06 56.2 168 43.5
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 6.5e-06 55.8 173 43.4
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 6.5e-06 55.8 88 37.5
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 6.5e-06 55.8 68 45.6
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 8.5e-06 55.5 172 43.6
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 8.5e-06 55.5 172 43.6
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 8.5e-06 55.5 172 43.6


User provided reference genes

Program Settings