Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 4.8e-85 317.8 157 100.0
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 2.7e-64 248.8 147 83.0
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 5.1e-63 244.6 148 81.8
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 2.5e-54 215.7 141 71.6
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 2.2e-53 212.6 147 72.1
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 1.5e-51 206.5 124 77.4
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 2.0e-51 206.1 141 68.8
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 1.7e-50 203.0 151 66.9
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 2.9e-50 202.2 153 65.4
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 3.8e-50 201.8 124 75.0
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 5.0e-50 201.4 141 65.2
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 8.5e-50 200.7 128 71.1
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 3.2e-49 198.7 124 73.4
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 9.4e-49 197.2 145 66.9
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 1.2e-48 196.8 124 72.6
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 1.6e-48 196.4 124 72.6
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 7.9e-48 194.1 120 74.2
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 2.3e-47 192.6 157 60.5
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 2.3e-47 192.6 154 62.3
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 3.0e-47 192.2 149 64.4
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 3.9e-47 191.8 145 64.8
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 6.7e-47 191.0 147 64.6
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 2.6e-46 189.1 121 71.1
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 4.4e-46 188.3 146 63.7
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 7.4e-46 187.6 124 71.8
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 1.1e-44 183.7 153 58.8
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 1.4e-44 183.3 120 70.0
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.8e-44 183.0 148 61.5
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 5.3e-44 181.4 138 63.0
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 6.9e-44 181.0 147 59.9
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.2e-43 180.3 144 60.4
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 1.5e-43 179.9 156 57.7
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 2.0e-43 179.5 150 59.3
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 2.0e-43 179.5 150 61.3
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 2.6e-43 179.1 148 56.8
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 4.5e-43 178.3 152 57.9
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 7.7e-43 177.6 141 59.6
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 1.0e-42 177.2 148 58.8
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 1.3e-42 176.8 125 67.2
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 1.3e-42 176.8 127 62.2
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.3e-42 176.8 135 64.4
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 1.3e-42 176.8 122 66.4
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 1.7e-42 176.4 127 63.0
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 2.2e-42 176.0 143 58.0
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 2.2e-42 176.0 148 57.4
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 2.9e-42 175.6 129 65.1
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 3.8e-42 175.3 157 54.1
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 3.8e-42 175.3 150 57.3
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 8.5e-42 174.1 121 66.9
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 1.9e-41 172.9 126 62.7
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 3.2e-41 172.2 138 60.1
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 4.2e-41 171.8 143 57.3
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 3.6e-40 168.7 120 65.8
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 4.7e-40 168.3 120 65.0
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 6.1e-40 167.9 120 65.0
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 1.4e-39 166.8 157 53.5
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 2.3e-39 166.0 120 65.0
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 3.0e-39 165.6 122 62.3
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 3.0e-39 165.6 122 62.3
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 3.9e-39 165.2 145 57.9
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 3.9e-39 165.2 162 53.1
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 6.7e-39 164.5 140 55.0
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 6.7e-39 164.5 142 57.7
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 8.8e-39 164.1 146 54.1
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 1.5e-38 163.3 143 55.2
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 1.5e-38 163.3 122 62.3
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 2.0e-38 162.9 152 55.9
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 3.3e-38 162.2 142 56.3
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 7.4e-38 161.0 128 58.6
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 9.7e-38 160.6 142 55.6
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 2.2e-37 159.5 143 54.5
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 2.2e-37 159.5 150 53.3
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 3.7e-37 158.7 143 54.5
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 3.7e-37 158.7 152 52.6
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 4.8e-37 158.3 143 54.5
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 4.8e-37 158.3 143 54.5
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 4.8e-37 158.3 150 54.0
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 8.2e-37 157.5 142 54.2
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 1.1e-36 157.1 143 53.8
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 4.1e-36 155.2 153 50.3
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 5.3e-36 154.8 149 55.0
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 9.1e-36 154.1 139 51.1
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 9.1e-36 154.1 141 53.9
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 2.0e-35 152.9 142 52.8
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 2.6e-35 152.5 142 52.1
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 7.7e-35 151.0 148 53.4
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 7.7e-35 151.0 148 53.4
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 7.7e-35 151.0 107 63.6
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 1.0e-34 150.6 157 51.0
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.7e-34 149.8 106 66.0
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 6.5e-34 147.9 140 52.9
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 1.5e-33 146.7 107 64.5
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 1.5e-33 146.7 111 65.8
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 5.5e-33 144.8 137 50.4
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 5.5e-33 144.8 127 52.0
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 7.2e-33 144.4 126 54.0
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 9.4e-33 144.1 114 59.6
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 4.7e-32 141.7 121 51.2
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 3.3e-30 135.6 97 67.0
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.5e-27 125.6 145 45.5
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.7e-27 124.4 84 75.0
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 8.6e-18 94.4 68 67.6
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 1.5e-14 83.6 58 67.2
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 2.0e-14 83.2 58 69.0
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 2.2e-13 79.7 67 53.7
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 1.6e-11 73.6 108 38.9
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.5e-11 72.0 109 33.9
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 7.3e-09 64.7 106 34.0
Pp3c7_26210 Physcomitrium patens HOM05D021038 ORTHO05D009018 1.8e-07 60.1 109 31.2
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 4.0e-07 58.9 107 28.0
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 8.9e-07 57.8 109 33.0
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 1.5e-06 57.0 109 33.0
Pp3c1_6510 Physcomitrium patens HOM05D021038 ORTHO05D009018 2.0e-06 56.6 109 29.4
ATR0414G002 Amborella trichopoda HOM05D007363 ORTHO05D009018 4.4e-06 55.5 94 36.2
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 5.8e-06 55.1 109 33.0
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.8e-06 55.1 109 32.1
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.8e-06 55.1 109 32.1
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 5.8e-06 55.1 109 32.1


User provided reference genes

Program Settings