Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 5.3e-63 244.2 125 100.0
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.4e-47 193.0 119 79.8
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.0e-46 189.1 113 85.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.6e-43 179.5 114 78.9
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.1e-43 179.1 115 78.3
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 6.1e-43 177.6 115 76.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 5.2e-42 174.5 114 75.4
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 6.8e-42 174.1 115 77.4
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 8.8e-42 173.7 110 80.0
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.6e-41 172.2 114 71.9
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 3.4e-41 171.8 110 77.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 4.4e-41 171.4 110 75.5
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 5.7e-41 171.0 115 76.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 5.7e-41 171.0 110 77.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.7e-40 169.5 110 75.5
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.7e-40 169.5 110 76.4
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.7e-40 169.5 110 76.4
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.8e-40 168.7 110 75.5
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.8e-40 168.7 110 74.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 3.7e-40 168.3 112 74.1
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.8e-40 167.9 117 70.1
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 8.3e-40 167.2 110 75.5
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.1e-39 166.8 118 73.7
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.1e-39 166.8 110 73.6
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 1.1e-39 166.8 112 72.3
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.8e-39 166.0 114 74.6
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.4e-39 165.6 117 74.4
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 2.4e-39 165.6 115 73.9
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 3.1e-39 165.2 107 72.0
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 3.1e-39 165.2 110 71.8
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 5.4e-39 164.5 110 73.6
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 7.0e-39 164.1 109 77.1
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 7.0e-39 164.1 114 71.9
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 9.1e-39 163.7 112 73.2
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.6e-38 162.9 114 73.7
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.6e-38 162.9 112 73.2
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 2.0e-38 162.5 110 74.5
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.7e-38 162.2 111 74.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.7e-38 162.2 116 73.3
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.5e-38 161.8 109 70.6
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 4.5e-38 161.4 113 70.8
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 4.5e-38 161.4 112 71.4
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.9e-38 161.0 112 70.5
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 7.7e-38 160.6 110 71.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 7.7e-38 160.6 125 65.6
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 7.7e-38 160.6 116 69.0
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.0e-37 160.2 115 69.6
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.9e-37 158.7 114 69.3
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.9e-37 158.7 120 67.5
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 2.9e-37 158.7 118 68.6
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 3.8e-37 158.3 97 82.5
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 5.0e-37 157.9 109 68.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 5.0e-37 157.9 112 69.6
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 6.5e-37 157.5 110 70.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.1e-36 156.8 117 64.1
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.5e-36 156.4 117 71.8
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 3.3e-36 155.2 113 70.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 3.3e-36 155.2 113 69.0
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 3.3e-36 155.2 114 68.4
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 3.3e-36 155.2 115 69.6
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 3.3e-36 155.2 110 70.9
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 4.2e-36 154.8 115 67.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 5.5e-36 154.5 115 67.8
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 5.5e-36 154.5 110 70.9
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 5.5e-36 154.5 112 67.9
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 7.2e-36 154.1 113 69.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 7.2e-36 154.1 106 71.7
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.6e-35 152.9 136 59.6
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.8e-35 152.1 110 70.0
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 3.6e-35 151.8 114 69.3
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 4.7e-35 151.4 110 69.1
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 6.1e-35 151.0 115 66.1
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 6.1e-35 151.0 110 69.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 8.0e-35 150.6 112 67.0
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.0e-34 150.2 113 68.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.0e-34 150.2 112 65.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.0e-34 150.2 112 67.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.4e-34 149.8 118 65.3
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 7.5e-33 144.1 115 64.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.4e-31 139.0 91 76.9
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 3.1e-31 138.7 85 77.6
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 4.1e-31 138.3 105 66.7
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 7.0e-31 137.5 87 78.2
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.6e-30 136.3 90 74.4
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.7e-30 135.6 84 78.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 3.5e-30 135.2 82 81.7
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 7.8e-30 134.0 97 70.1
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.3e-29 133.3 83 77.1
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.3e-29 133.3 84 77.4
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.3e-29 132.5 82 79.3
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 5.0e-29 131.3 82 75.6
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 3.3e-28 128.6 82 75.6
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.2e-27 126.7 89 68.5
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 3.6e-27 125.2 83 75.9
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 4.7e-27 124.8 182 43.4
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 4.7e-27 124.8 79 78.5
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 3.0e-26 122.1 113 58.4
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.0e-26 121.7 90 72.2
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.2e-25 120.2 85 68.2
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.7e-24 116.3 72 79.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 6.4e-24 114.4 83 68.7
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 3.0e-21 105.5 79 69.6
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.1e-20 103.6 108 51.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 3.6e-19 98.6 80 61.2
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.2e-17 93.6 64 75.0
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.0e-17 92.8 104 55.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.2e-16 89.4 52 82.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.2e-15 85.5 54 74.1
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 5.4e-15 84.7 51 78.4
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 7.0e-15 84.3 67 62.7
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 9.2e-15 84.0 117 41.0
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.5e-12 73.9 54 74.1
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.1e-07 58.5 108 37.0


User provided reference genes

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