Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 2.9e-74 282.0 158 100.0
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.9e-63 245.0 173 79.8
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 7.0e-52 207.6 173 65.3
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 5.9e-51 204.5 173 64.7
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 2.7e-35 152.5 175 54.9
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 2.7e-35 152.5 175 52.0
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 7.7e-35 151.0 176 54.5
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 7.7e-35 151.0 176 55.1
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 6.6e-34 147.9 173 53.2
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.1e-33 147.1 173 50.9
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 3.3e-33 145.6 175 49.7
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 2.1e-32 142.9 175 50.9
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.3e-31 139.4 173 49.1
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.3e-31 139.4 173 49.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 3.0e-31 139.0 164 51.2
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 3.0e-31 139.0 173 49.1
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 6.8e-31 137.9 172 47.1
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 8.9e-31 137.5 173 48.6
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.5e-30 136.7 168 49.4
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 2.0e-30 136.3 173 46.8
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 5.7e-30 134.8 172 50.6
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 9.8e-30 134.0 173 48.6
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.3e-29 133.7 168 47.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 1.7e-29 133.3 174 48.9
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 4.9e-29 131.7 168 47.6
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 6.4e-29 131.3 173 48.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 6.4e-29 131.3 168 47.0
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 8.3e-29 131.0 173 48.0
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 1.8e-28 129.8 174 48.9
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.2e-28 129.0 173 45.1
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 7.0e-28 127.9 173 46.2
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 9.2e-28 127.5 175 44.0
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.2e-27 127.1 175 45.1
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 1.2e-27 127.1 173 47.4
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 2.0e-27 126.3 172 44.8
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.7e-27 125.9 173 47.4
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 3.5e-27 125.6 173 44.5
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 4.6e-27 125.2 174 44.8
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 5.9e-27 124.8 175 43.4
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 1.3e-26 123.6 171 43.9
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 1.5e-25 120.2 173 42.2
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 1.5e-25 120.2 173 43.9
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 1.5e-25 120.2 175 46.3
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 2.5e-25 119.4 173 43.9
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 4.3e-25 118.6 173 42.8
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 4.3e-25 118.6 171 43.3
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 4.3e-25 118.6 176 46.0
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 5.6e-25 118.2 173 42.8
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 5.6e-25 118.2 171 42.1
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 5.6e-25 118.2 170 42.9
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 2.8e-24 115.9 173 42.2
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 4.7e-24 115.2 171 40.9
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 6.2e-24 114.8 175 41.7
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.0e-23 114.0 171 42.7
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 1.0e-23 114.0 165 40.0
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.0e-23 114.0 170 40.0
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.4e-23 113.6 171 41.5
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.4e-23 113.6 171 42.1
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.8e-23 113.2 171 42.7
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 2.3e-23 112.8 183 39.9
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 4.0e-23 112.1 170 44.7
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 6.8e-23 111.3 165 39.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.2e-22 110.5 178 42.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 3.4e-22 109.0 183 42.6
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 7.5e-22 107.8 174 39.7
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 7.5e-22 107.8 174 39.7
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 7.5e-22 107.8 173 43.4
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.7e-21 106.7 170 38.2
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 1.7e-21 106.7 173 41.0
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 2.9e-21 105.9 170 38.2
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 2.9e-21 105.9 170 38.2
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 2.9e-21 105.9 170 38.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 6.4e-21 104.8 124 51.6
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 1.1e-20 104.0 174 41.4
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.4e-20 103.6 173 42.2
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.4e-20 103.6 173 42.2
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.9e-20 103.2 117 46.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.9e-20 103.2 182 37.4
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 3.2e-20 102.4 137 45.3
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 4.1e-20 102.1 184 41.3
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 7.0e-20 101.3 117 47.9
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.6e-19 100.1 141 45.4
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.7e-19 99.4 201 36.3
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 6.0e-19 98.2 168 39.9
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 7.8e-19 97.8 119 52.1
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 1.3e-18 97.1 180 38.3
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.5e-17 93.6 180 36.7
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 1.9e-17 93.2 179 36.9
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 4.3e-17 92.0 116 49.1
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 9.5e-17 90.9 182 35.2
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 2.1e-16 89.7 180 35.6
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 2.8e-16 89.4 183 38.8
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 3.6e-16 89.0 183 34.4
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 3.6e-16 89.0 182 35.7
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 4.7e-16 88.6 116 44.0
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.8e-15 86.7 173 40.5
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 1.2e-14 84.0 117 48.7
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.5e-14 83.6 125 40.0
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 9.8e-14 80.9 116 40.5
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 9.8e-14 80.9 174 35.1
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 1.3e-13 80.5 109 45.0
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.1e-12 77.4 170 35.3
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 1.6e-11 73.6 145 35.2
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 7.8e-11 71.2 139 34.5
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 5.1e-10 68.6 54 64.8
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 7.3e-09 64.7 160 32.5
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.2e-08 63.9 54 66.7
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.8e-07 60.1 161 34.2
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 5.2e-07 58.5 173 31.2


User provided reference genes

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