Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 3.2e-88 328.6 187 100.0
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 2.6e-45 186.0 197 62.9
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 6.3e-44 181.4 190 61.1
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 8.9e-38 161.0 171 54.4
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 1.1e-35 154.1 191 52.4
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 9.2e-35 151.0 179 54.2
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.6e-34 150.2 171 55.0
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.6e-34 150.2 179 54.2
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 1.6e-34 150.2 165 53.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 4.6e-34 148.7 165 53.9
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.7e-33 146.7 180 57.2
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 3.9e-33 145.6 173 50.3
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 3.9e-33 145.6 170 51.2
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 8.6e-33 144.4 166 57.2
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 8.6e-33 144.4 171 53.8
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 1.1e-32 144.1 179 50.8
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 1.1e-32 144.1 165 53.9
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 1.9e-32 143.3 192 50.5
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 3.3e-32 142.5 182 52.7
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 3.3e-32 142.5 169 53.8
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 5.6e-32 141.7 165 55.2
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 5.6e-32 141.7 191 56.0
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 9.5e-32 141.0 156 51.9
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.6e-31 140.2 186 49.5
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 2.1e-31 139.8 179 50.8
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 2.8e-31 139.4 164 53.0
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 2.8e-31 139.4 172 53.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 2.8e-31 139.4 173 52.0
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 2.8e-31 139.4 168 54.8
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 3.6e-31 139.0 174 50.6
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 8.0e-31 137.9 184 49.5
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.4e-30 137.1 184 51.1
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.8e-30 136.7 164 53.7
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.8e-30 136.7 149 52.3
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 3.1e-30 136.0 189 54.0
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.1e-30 136.0 170 54.1
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 5.2e-30 135.2 188 49.5
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 5.2e-30 135.2 184 48.4
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 8.9e-30 134.4 186 47.8
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 8.9e-30 134.4 156 52.6
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 8.9e-30 134.4 170 52.9
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.2e-29 134.0 189 48.1
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.2e-29 134.0 185 49.7
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.5e-29 133.7 171 50.3
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 5.8e-29 131.7 188 46.8
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 7.5e-29 131.3 164 51.8
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.3e-28 130.6 153 49.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.7e-28 130.2 164 49.4
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.7e-28 130.2 173 50.3
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 8.3e-28 127.9 170 55.3
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.4e-27 126.3 205 50.2
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.0e-27 124.8 189 43.9
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.6e-26 123.6 164 55.5
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 2.0e-26 123.2 165 47.9
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.7e-26 122.9 204 47.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 2.7e-26 122.9 149 49.7
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 2.7e-26 122.9 185 50.3
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 3.5e-26 122.5 171 48.0
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.5e-26 122.5 171 48.0
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 7.8e-26 121.3 185 47.0
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.7e-25 120.2 180 46.1
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.7e-25 120.2 170 46.5
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 3.9e-25 119.0 168 44.6
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 3.9e-25 119.0 169 45.6
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 5.0e-25 118.6 191 42.4
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 5.0e-25 118.6 152 50.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 6.6e-25 118.2 164 45.1
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 6.6e-25 118.2 165 53.9
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 6.6e-25 118.2 188 45.2
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 6.6e-25 118.2 144 49.3
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 8.6e-25 117.9 166 45.8
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.5e-24 117.1 198 50.5
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.5e-24 116.3 171 46.8
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 4.3e-24 115.5 179 43.6
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 7.3e-24 114.8 164 43.9
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 7.3e-24 114.8 206 38.3
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.2e-23 114.0 167 44.3
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.6e-23 113.6 168 45.2
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 1.6e-23 113.6 171 46.2
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 8.1e-23 111.3 166 43.4
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.1e-22 110.9 211 39.8
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.4e-22 110.5 217 41.5
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 1.8e-22 110.2 209 39.2
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 4.0e-22 109.0 161 45.3
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 2.0e-21 106.7 154 46.1
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 3.4e-21 105.9 180 43.9
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 4.4e-21 105.5 164 47.0
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 5.8e-21 105.1 180 46.1
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 5.8e-21 105.1 168 45.2
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 5.8e-21 105.1 166 48.8
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 5.8e-21 105.1 166 48.8
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 5.8e-21 105.1 219 37.9
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 7.5e-21 104.8 219 37.4
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.1e-19 100.9 166 48.2
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 4.1e-19 99.0 166 48.2
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 7.1e-19 98.2 166 47.6
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 9.2e-19 97.8 165 46.1
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.7e-18 96.3 181 46.4
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 6.0e-18 95.1 163 44.8
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.0e-17 94.4 156 42.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.5e-16 90.5 189 39.7
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.9e-16 90.1 152 46.7
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 4.3e-16 89.0 142 43.7
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 4.3e-16 89.0 145 44.1
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.0e-13 80.1 142 38.0
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 2.9e-12 76.3 126 41.3
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.9e-12 75.5 149 41.6
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.1e-11 74.3 111 43.2
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 2.7e-10 69.7 112 48.2
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 3.5e-10 69.3 55 65.5
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 6.0e-10 68.6 146 44.5
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 7.8e-10 68.2 146 44.5
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 3.0e-09 66.2 134 41.8
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 5.1e-09 65.5 66 51.5
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.9e-08 63.5 77 59.7
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.1e-06 57.8 61 59.0
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 8.9e-06 54.7 215 35.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 8.9e-06 54.7 117 34.2


User provided reference genes

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