Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 4.9e-199 697.6 345 100.0
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 8.5e-111 404.4 293 72.7
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 4.5e-96 355.5 305 65.6
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 7.5e-91 338.2 283 61.5
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 9.1e-89 331.3 294 58.8
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 9.1e-89 331.3 275 62.2
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 1.6e-88 330.5 283 61.1
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 1.6e-88 330.5 279 60.6
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.5e-88 329.3 285 60.7
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 5.9e-88 328.6 275 61.8
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 2.2e-87 326.6 312 57.4
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 6.5e-87 325.1 268 64.2
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 1.9e-86 323.6 312 56.7
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 1.2e-85 320.9 311 56.9
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 8.0e-85 318.2 294 58.2
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 8.0e-85 318.2 295 58.3
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 1.0e-84 317.8 295 58.0
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 1.4e-84 317.4 293 58.0
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 1.8e-84 317.0 273 60.4
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 1.8e-84 317.0 272 61.0
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 1.8e-84 317.0 269 62.1
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 1.8e-84 317.0 282 56.7
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 3.0e-84 316.2 276 59.4
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 5.2e-84 315.5 328 54.0
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 6.8e-84 315.1 272 59.2
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 8.8e-84 314.7 277 59.9
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 8.8e-84 314.7 293 56.7
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 1.5e-83 313.9 267 60.3
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 1.5e-83 313.9 319 54.9
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 2.0e-83 313.5 296 57.8
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 2.6e-83 313.2 305 57.7
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 3.4e-83 312.8 273 59.7
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 4.4e-83 312.4 278 59.4
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 7.5e-83 311.6 272 60.3
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 9.8e-83 311.2 287 57.1
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 9.8e-83 311.2 276 59.8
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 9.8e-83 311.2 273 59.7
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 1.3e-82 310.8 336 53.6
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.2e-82 310.1 272 60.3
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 3.7e-82 309.3 349 51.9
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 3.7e-82 309.3 312 54.5
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 4.9e-82 308.9 265 60.4
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 1.1e-81 307.8 333 52.6
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.4e-81 307.4 272 59.6
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 2.4e-81 306.6 312 54.5
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 2.4e-81 306.6 271 58.7
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 3.1e-81 306.2 285 55.4
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 3.1e-81 306.2 273 58.6
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.0e-81 305.1 283 57.6
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 9.2e-81 304.7 342 52.3
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 9.2e-81 304.7 270 58.5
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 9.2e-81 304.7 272 59.6
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 1.2e-80 304.3 282 56.7
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 1.2e-80 304.3 282 56.4
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 1.2e-80 304.3 270 58.9
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 2.0e-80 303.5 315 55.2
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 3.5e-80 302.8 282 55.7
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 3.5e-80 302.8 291 54.6
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 4.5e-80 302.4 270 59.3
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 5.9e-80 302.0 273 58.2
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 7.8e-80 301.6 282 56.0
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 1.3e-79 300.8 278 57.9
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 1.7e-79 300.4 312 52.6
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 1.7e-79 300.4 324 53.1
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 2.3e-79 300.1 285 55.8
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 6.6e-79 298.5 275 55.6
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 8.6e-79 298.1 306 53.3
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 1.1e-78 297.7 313 52.4
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 1.5e-78 297.4 310 53.5
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 1.5e-78 297.4 312 52.9
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 1.9e-78 297.0 278 57.2
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 2.5e-78 296.6 312 52.2
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 2.5e-78 296.6 285 54.4
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 4.3e-78 295.8 333 52.3
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 4.7e-77 292.4 291 54.3
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 8.0e-77 291.6 314 52.2
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 8.0e-77 291.6 304 52.0
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.0e-76 291.2 277 58.5
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 4.0e-76 289.3 299 54.8
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 5.2e-76 288.9 306 53.3
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 6.8e-76 288.5 298 54.4
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 8.9e-76 288.1 259 59.5
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 1.2e-75 287.7 257 58.0
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 4.9e-74 282.3 283 53.4
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 1.1e-73 281.2 316 50.3
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.8e-73 280.4 300 50.7
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 1.8e-73 280.4 283 53.4
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 3.5e-72 276.2 302 52.3
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 7.8e-72 275.0 298 51.0
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 1.1e-70 271.2 299 51.2
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 1.1e-70 271.2 267 56.9
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.5e-70 270.8 318 48.1
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 1.5e-70 270.8 297 49.5
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 1.9e-70 270.4 248 55.2
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 1.9e-70 270.4 295 51.9
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 2.5e-70 270.0 259 57.9
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 4.3e-70 269.2 277 52.3
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.2e-69 267.7 305 48.5
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 1.2e-69 267.7 289 52.6
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 2.1e-69 266.9 279 51.3
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 3.6e-69 266.2 276 51.8
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 4.7e-69 265.8 314 47.8
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 8.0e-69 265.0 242 57.9
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 8.0e-69 265.0 335 45.4
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.1e-68 264.6 271 52.8
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 1.4e-68 264.2 235 58.7
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 2.3e-68 263.5 299 48.5
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 3.1e-68 263.1 269 53.2
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 8.9e-68 261.5 271 52.4
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 8.9e-68 261.5 271 52.4
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 1.5e-67 260.8 336 46.4
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 6.4e-66 255.4 330 47.3
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 8.3e-66 255.0 349 43.6
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 2.3e-63 246.9 273 50.9
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 7.3e-62 241.9 172 68.6
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 8.9e-60 235.0 323 43.3
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 2.2e-58 230.3 207 58.9
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.1e-57 225.3 338 41.1
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 2.1e-56 223.8 264 46.2
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 1.3e-55 221.1 188 62.8
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.3e-55 220.3 306 41.8
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 6.6e-55 218.8 274 46.7
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 2.5e-54 216.9 325 43.4
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 2.5e-54 216.9 343 40.5
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 3.3e-54 216.5 258 46.9
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 1.6e-53 214.2 273 44.3
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 1.1e-52 211.5 225 51.1
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 1.7e-50 204.1 292 44.5
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 7.1e-49 198.7 193 53.9
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 7.1e-49 198.7 181 58.0
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 9.2e-49 198.4 269 44.6
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 4.6e-48 196.1 181 57.5
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 1.3e-47 194.5 197 53.3
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.0e-43 180.6 148 62.2
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 5.4e-41 172.6 180 51.7
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.6e-40 171.0 136 59.6
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 6.0e-40 169.1 163 51.5
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.3e-39 167.2 201 45.3
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 4.0e-36 156.4 270 34.8
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 5.3e-36 156.0 147 53.1
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 2.8e-29 133.7 137 54.0
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 9.3e-25 118.6 92 64.1
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 9.3e-25 118.6 140 46.4
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 3.9e-23 113.2 251 31.5
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 3.9e-23 113.2 98 58.2
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 3.7e-21 106.7 75 64.0
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 6.5e-18 95.9 283 28.6
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 6.5e-18 95.9 134 44.0
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.1e-14 85.1 59 62.7
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 1.9e-14 84.3 280 27.1


User provided reference genes

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