Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 7.1e-70 267.3 151 100.0
ECA234G0512 Erigeron canadensis HOM05D023078 ORTHO05D003943 8.8e-28 127.5 156 57.1
ECA234G0883 Erigeron canadensis HOM05D023078 ORTHO05D003943 8.8e-28 127.5 156 57.1
ECA234G1138 Erigeron canadensis HOM05D023078 ORTHO05D003943 5.9e-24 114.8 147 54.4
ECA234G1326 Erigeron canadensis HOM05D023078 ORTHO05D003943 1.1e-19 100.5 132 52.3
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 2.6e-16 89.4 141 47.5
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 1.3e-15 87.0 155 45.2
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.1e-14 84.0 151 46.4
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 5.5e-14 81.6 142 47.2
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 2.7e-13 79.3 144 41.7
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.4e-12 77.0 161 37.9
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 1.8e-12 76.6 152 44.1
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 2.3e-12 76.3 151 41.1
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.7e-12 74.7 145 42.1
ECA234G4595 Erigeron canadensis HOM05D000045 ORTHO05D000067 8.8e-12 74.3 130 44.6
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 4.4e-11 72.0 158 38.6
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 9.7e-11 70.9 145 42.8
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 9.7e-11 70.9 145 42.8
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.3e-10 70.5 162 39.5
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.3e-10 70.5 158 37.3
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 2.2e-10 69.7 149 36.9
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.2e-10 69.7 146 38.4
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 2.8e-10 69.3 149 37.6
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.7e-10 68.9 153 36.6
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 3.7e-10 68.9 130 43.8
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 3.7e-10 68.9 161 40.4
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 4.8e-10 68.6 133 41.4
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 6.3e-10 68.2 148 36.5
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 124 44.4
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-09 67.0 125 45.6
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 1.8e-09 66.6 157 36.9
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.4e-09 66.2 147 38.8
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 3.1e-09 65.9 151 34.4
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 4.1e-09 65.5 151 39.1
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.0e-09 64.7 155 36.1
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 7.0e-09 64.7 156 37.2
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 9.1e-09 64.3 126 42.9
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 9.1e-09 64.3 146 39.7
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 1.2e-08 63.9 156 37.8
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 2.7e-08 62.8 120 44.2
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.5e-08 62.4 150 40.7
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 3.5e-08 62.4 148 37.2
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.5e-08 62.4 148 37.2
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 3.5e-08 62.4 148 35.8
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 3.5e-08 62.4 147 35.4
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 3.5e-08 62.4 152 37.5
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 7.7e-08 61.2 150 36.7
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.0e-07 60.8 143 37.1
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 1.0e-07 60.8 156 37.2
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.7e-07 60.1 148 37.2
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.7e-07 60.1 148 36.5
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.2e-07 59.7 146 34.9
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.2e-07 59.7 157 33.8
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 2.2e-07 59.7 153 37.3
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 2.9e-07 59.3 155 33.5
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 2.9e-07 59.3 154 34.4
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 2.9e-07 59.3 148 35.8
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 3.8e-07 58.9 140 35.7
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 5.0e-07 58.5 137 35.8
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 5.0e-07 58.5 153 37.9
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.5e-07 58.2 144 41.0
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 6.5e-07 58.2 141 37.6
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 6.5e-07 58.2 152 36.2
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.5e-06 57.0 144 37.5
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 1.9e-06 56.6 125 40.8
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.5e-06 56.2 137 35.8
QL06p009717 Quercus lobata HOM05D003565 ORTHO05D003943 2.5e-06 56.2 125 39.2
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 3.2e-06 55.8 141 39.0
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 3.2e-06 55.8 125 39.2
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 3.2e-06 55.8 125 39.2
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.2e-06 55.5 139 34.5
QL06p009739 Quercus lobata HOM05D003565 ORTHO05D003943 5.5e-06 55.1 125 39.2
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.2e-06 54.7 134 36.6
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 7.2e-06 54.7 155 34.2
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 9.4e-06 54.3 127 39.4
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 9.4e-06 54.3 146 34.2


User provided reference genes

Program Settings