Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 8.1e-177 623.6 315 100.0
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 1.9e-109 399.8 309 66.0
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 7.5e-106 387.9 313 66.1
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.1e-85 320.9 330 53.6
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 1.9e-85 320.1 320 54.1
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 4.4e-82 308.9 338 50.3
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 3.8e-81 305.8 333 48.6
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 3.2e-80 302.8 335 49.6
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 5.4e-80 302.0 323 48.3
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 3.5e-79 299.3 333 47.4
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 4.6e-79 298.9 339 49.9
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.3e-78 297.4 338 49.7
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 2.3e-78 296.6 320 49.7
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 2.3e-78 296.6 325 49.2
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 2.3e-78 296.6 338 47.3
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 1.5e-77 293.9 326 47.9
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 1.5e-77 293.9 326 49.4
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 7.3e-77 291.6 347 46.7
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 1.2e-76 290.8 321 49.2
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 5.2e-75 285.4 323 49.5
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 6.9e-75 285.0 330 49.7
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 1.2e-74 284.3 323 49.5
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 1.2e-74 284.3 337 46.0
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.5e-74 283.9 333 48.9
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 2.0e-74 283.5 341 46.0
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 2.0e-74 283.5 326 47.2
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 2.0e-74 283.5 315 49.2
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 2.6e-74 283.1 320 47.5
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 2.6e-74 283.1 313 49.5
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 2.6e-74 283.1 339 46.9
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 3.4e-74 282.7 331 46.8
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 7.6e-74 281.6 329 47.1
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 9.9e-74 281.2 309 46.6
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.7e-73 280.4 328 48.2
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 2.9e-73 279.6 318 48.1
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.9e-73 279.6 330 47.3
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 4.9e-73 278.9 336 46.1
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 4.9e-73 278.9 326 48.2
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 6.4e-73 278.5 331 45.9
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 6.4e-73 278.5 327 45.3
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 1.4e-72 277.3 335 44.8
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.4e-72 277.3 318 48.7
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.4e-72 275.4 305 50.8
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 5.4e-72 275.4 328 47.3
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 1.2e-71 274.2 328 45.7
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 2.1e-71 273.5 330 47.9
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 2.1e-71 273.5 324 49.1
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 3.5e-71 272.7 332 45.2
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 3.5e-71 272.7 328 47.3
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 4.6e-71 272.3 366 43.7
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 4.6e-71 272.3 329 45.9
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 1.3e-70 270.8 315 47.9
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 1.7e-70 270.4 329 47.4
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 3.9e-70 269.2 321 47.7
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 6.6e-70 268.5 349 42.4
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 6.6e-70 268.5 318 48.1
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 1.9e-69 266.9 323 44.3
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 1.9e-69 266.9 380 43.4
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 2.5e-69 266.5 340 43.8
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 4.3e-69 265.8 342 42.7
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 5.6e-69 265.4 321 47.7
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.0e-66 256.9 286 49.7
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.8e-65 252.7 318 46.9
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 2.4e-64 250.0 293 47.8
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 2.7e-63 246.5 273 48.0
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 3.0e-62 243.0 282 48.2
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 5.6e-61 238.8 309 43.0
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 1.3e-60 237.7 326 44.5
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 8.1e-60 235.0 277 46.9
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 3.8e-57 226.1 273 48.4
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 3.8e-57 226.1 304 43.8
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 6.4e-57 225.3 261 48.3
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 1.9e-56 223.8 338 37.9
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 2.4e-56 223.4 398 37.2
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 1.9e-53 213.8 265 46.4
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 3.8e-49 199.5 218 49.5
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 6.7e-46 188.7 326 37.1
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 2.4e-43 180.3 301 39.5
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 3.1e-43 179.9 338 34.9
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 3.4e-42 176.4 307 37.8
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 5.0e-41 172.6 221 45.7
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 8.5e-41 171.8 298 36.2
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 3.9e-38 162.9 197 45.7
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 9.1e-35 151.8 326 35.6
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.4e-30 137.9 107 63.6
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 8.8e-30 135.2 104 65.4
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 4.5e-26 122.9 106 53.8
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 5.0e-25 119.4 111 53.2
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 6.5e-25 119.0 129 47.3
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.9e-24 117.5 98 59.2
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 2.5e-24 117.1 113 52.2
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 4.1e-19 99.8 145 38.6
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.1e-16 91.7 367 24.3
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 1.8e-14 84.3 151 35.8
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 2.9e-09 67.0 57 59.6
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 3.2e-08 63.5 190 25.8
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.8e-06 57.8 72 45.8


User provided reference genes

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