Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.3e-51 206.1 102 100.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 3.0e-48 194.9 102 93.1
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 7.0e-45 183.7 99 90.9
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.9e-35 151.8 101 73.3
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.8e-35 151.4 99 70.7
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.0e-35 151.0 95 74.7
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 6.5e-35 150.6 97 71.1
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 6.5e-35 150.6 97 71.1
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.5e-35 150.6 98 71.4
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 6.5e-35 150.6 97 71.1
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 6.5e-35 150.6 96 71.9
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 6.5e-35 150.6 101 72.3
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 6.5e-35 150.6 101 72.3
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 8.5e-35 150.2 99 70.7
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.5e-34 148.7 99 69.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.5e-34 148.7 95 72.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.5e-34 148.7 95 72.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.5e-34 148.7 95 72.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.2e-34 148.3 98 70.4
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.2e-34 148.3 99 68.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.2e-34 148.3 99 68.7
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.2e-34 147.9 99 68.7
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 4.2e-34 147.9 99 67.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 7.2e-34 147.1 101 70.3
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 7.2e-34 147.1 97 72.2
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 9.4e-34 146.7 97 70.1
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.2e-33 146.4 102 66.7
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.2e-33 146.4 101 68.3
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.6e-33 146.0 102 65.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.6e-33 146.0 101 66.3
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.1e-33 145.6 98 69.4
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.7e-33 145.2 101 65.3
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.7e-33 145.2 103 68.9
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.6e-33 144.8 101 65.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 68.9
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 4.7e-33 144.4 105 67.6
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 4.7e-33 144.4 101 68.3
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.7e-33 144.4 102 64.7
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 8.0e-33 143.7 101 67.3
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.0e-32 143.3 102 66.7
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.0e-32 143.3 99 66.7
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.0e-32 143.3 101 70.3
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.0e-32 143.3 96 67.7
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.0e-32 143.3 96 67.7
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.4e-32 142.9 97 68.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.4e-32 142.9 97 68.0
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.4e-32 142.9 101 68.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.8e-32 142.5 95 69.5
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 5.2e-32 141.0 101 64.4
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 6.8e-32 140.6 94 69.1
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 8.8e-32 140.2 96 66.7
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.2e-31 139.8 100 67.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.2e-31 139.8 101 64.4
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.5e-31 139.4 96 66.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.5e-31 139.4 90 72.2
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.5e-31 139.4 98 66.3
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.6e-31 138.7 96 65.6
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.6e-31 138.7 96 64.6
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.6e-31 138.7 96 68.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.4e-31 138.3 95 66.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 71.7
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 71.7
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.4e-31 137.9 95 69.5
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 5.7e-31 137.5 92 68.5
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 5.7e-31 137.5 100 64.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 9.8e-31 136.7 95 67.4
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 9.8e-31 136.7 96 66.7
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.8e-31 136.7 100 66.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-30 136.3 96 64.6
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.7e-30 136.0 95 67.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.7e-30 136.0 102 61.8
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.7e-30 136.0 92 67.4
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.2e-30 135.6 96 64.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.2e-30 135.6 95 64.2
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.8e-30 135.2 92 70.7
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 4.8e-30 134.4 95 66.3
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 8.3e-30 133.7 99 63.6
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 8.3e-30 133.7 92 65.2
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.3e-30 133.7 91 65.9
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.8e-29 132.5 96 63.5
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.8e-29 132.5 95 63.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.8e-29 132.5 96 64.6
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.4e-29 132.1 92 67.4
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.7e-27 125.9 91 63.7
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.5e-26 122.9 92 64.1
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.9e-26 122.5 92 63.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.5e-26 122.1 80 71.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.5e-26 122.1 70 85.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.3e-26 121.7 80 71.2
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 9.5e-26 120.2 145 46.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 9.5e-26 120.2 127 50.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.6e-25 119.4 87 65.5
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.6e-25 119.4 97 58.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 2.1e-25 119.0 75 74.7
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.0e-24 116.7 92 60.9
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.4e-24 116.3 82 68.3
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 3.0e-24 115.2 82 67.1
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 5.2e-24 114.4 79 69.6
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 6.8e-24 114.0 75 70.7
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 6.8e-24 114.0 92 60.9
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.9e-24 113.6 94 60.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.9e-24 113.6 91 57.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.5e-23 112.8 75 72.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 5.7e-23 110.9 89 59.6
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 2.8e-22 108.6 58 93.1
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.7e-22 108.2 77 67.5
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.3e-19 99.0 74 60.8
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.1e-17 92.4 97 50.5
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.4e-16 89.7 93 52.7
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.3e-16 89.0 56 73.2
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 3.0e-16 88.6 56 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.0e-16 88.2 74 58.1
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.7e-14 82.8 53 71.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.1e-09 65.9 46 69.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 6.8e-08 60.8 48 64.6
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.9e-06 55.5 53 52.8


User provided reference genes

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