Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.6e-104 382.9 206 100.0
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 4.5e-59 231.9 203 66.5
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 5.3e-44 181.8 186 58.6
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 7.0e-44 181.4 192 54.2
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 2.5e-41 172.9 200 54.5
Lsat_1_v5_gn_1_2780 Lactuca sativa HOM05D004728 ORTHO05D002375 3.0e-39 166.0 196 54.1
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 5.0e-34 148.7 202 48.5
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 1.4e-23 114.0 171 40.4
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 6.8e-23 111.7 192 40.1
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 3.7e-21 105.9 136 40.4
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 6.4e-21 105.1 146 40.4
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 5.4e-20 102.1 157 40.8
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.0e-18 95.5 158 35.4
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.0e-18 95.5 158 35.4
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.9e-17 93.6 118 40.7
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 2.5e-17 93.2 180 35.0
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 5.6e-17 92.0 120 40.0
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 8.0e-16 88.2 161 37.3
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.0e-16 88.2 120 39.2
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 8.0e-16 88.2 146 37.0
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 3.1e-15 86.3 101 39.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 5.2e-15 85.5 142 36.6
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 6.8e-15 85.1 111 42.3
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.0e-14 83.6 126 37.3
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 3.4e-14 82.8 144 36.1
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.4e-14 82.8 120 36.7
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 4.4e-14 82.4 146 37.0
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 4.4e-14 82.4 141 36.2
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 5.8e-14 82.0 165 33.3
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 5.8e-14 82.0 122 38.5
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 5.8e-14 82.0 135 34.8
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 5.8e-14 82.0 120 36.7
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 7.5e-14 81.6 125 38.4
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 9.8e-14 81.3 127 37.8
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 9.8e-14 81.3 112 36.6
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 9.8e-14 81.3 122 36.9
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 9.8e-14 81.3 142 34.5
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.7e-13 80.5 154 34.4
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 2.2e-13 80.1 168 33.3
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.9e-13 79.7 155 34.8
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.9e-13 79.7 110 39.1
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 3.7e-13 79.3 196 28.6
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.7e-13 79.3 119 35.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.9e-13 79.0 171 30.4
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 4.9e-13 79.0 179 36.9
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.4e-13 78.6 155 34.2
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 6.4e-13 78.6 149 33.6
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-12 77.8 154 33.8
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 1.4e-12 77.4 183 33.9
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.4e-12 77.4 109 38.5
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.9e-12 77.0 127 33.9
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 2.4e-12 76.6 175 30.9
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.4e-12 76.6 134 30.6
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 5.4e-12 75.5 154 33.1
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.4e-12 75.5 123 34.1
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 9.2e-12 74.7 154 32.5
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.0e-11 73.6 175 30.9
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.5e-11 72.8 118 33.9
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 6.0e-11 72.0 121 33.1
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.0e-11 72.0 135 32.6
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 6.0e-11 72.0 162 30.2
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 6.0e-11 72.0 172 29.7
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 7.8e-11 71.6 123 35.0
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.0e-10 71.2 123 33.3
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 1.3e-10 70.9 165 33.9
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 1.3e-10 70.9 178 31.5
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-10 70.5 150 32.0
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.7e-10 70.5 140 32.9
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 1.7e-10 70.5 144 31.9
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.3e-10 70.1 157 29.9
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.3e-10 70.1 137 32.8
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 2.3e-10 70.1 106 35.8
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.0e-10 69.7 157 29.9
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 3.9e-10 69.3 113 31.9
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 5.0e-10 68.9 146 36.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 5.0e-10 68.9 160 31.2
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 5.0e-10 68.9 104 34.6
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 6.6e-10 68.6 131 32.8
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 6.6e-10 68.6 142 29.6
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 6.6e-10 68.6 117 35.0
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.6e-10 68.2 180 32.8
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 8.6e-10 68.2 172 30.8
PSO675G1823 Papaver somniferum HOM05D015253 ORTHO05D023059 8.6e-10 68.2 156 29.5
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.1e-09 67.8 135 30.4
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 1.1e-09 67.8 135 30.4
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.1e-09 67.8 155 31.6
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 1.1e-09 67.8 172 30.2
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 1.1e-09 67.8 103 37.9
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.5e-09 67.4 133 31.6
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.5e-09 67.4 129 31.8
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.5e-09 67.4 180 31.7
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.5e-09 67.4 144 29.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.9e-09 67.0 154 31.2
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.9e-09 67.0 123 32.5
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 2.5e-09 66.6 153 31.4
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.3e-09 66.2 133 28.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 3.3e-09 66.2 119 31.1
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 3.3e-09 66.2 132 33.3
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 4.3e-09 65.9 146 29.5
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 5.6e-09 65.5 137 35.8
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 5.6e-09 65.5 174 27.0
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 1.2e-08 64.3 156 27.6
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.6e-08 63.9 122 32.8
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 2.1e-08 63.5 104 30.8
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 2.8e-08 63.2 159 30.2
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 2.8e-08 63.2 137 30.7
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 3.6e-08 62.8 161 30.4
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 3.6e-08 62.8 137 31.4
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.6e-08 62.8 147 28.6
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.7e-08 62.4 197 30.5
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 6.2e-08 62.0 131 29.8
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 6.2e-08 62.0 108 32.4
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 6.2e-08 62.0 150 30.7
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 8.1e-08 61.6 148 27.7
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 8.1e-08 61.6 115 32.2
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 8.1e-08 61.6 106 34.0
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-07 61.2 118 33.9
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 1.4e-07 60.8 112 28.6
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 1.4e-07 60.8 120 34.2
Sopen04g029740 Solanum pennellii HOM05D021150 ORTHO05D002375 1.4e-07 60.8 120 33.3
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 1.4e-07 60.8 167 31.7
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.8e-07 60.5 173 27.7
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.3e-07 60.1 173 25.4
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 2.3e-07 60.1 157 28.7
PSO675G4345 Papaver somniferum HOM05D015253 ORTHO05D023059 2.3e-07 60.1 148 27.0
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 2.3e-07 60.1 72 40.3
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 2.3e-07 60.1 143 27.3
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 3.1e-07 59.7 119 33.6
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 3.1e-07 59.7 145 30.3
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.2e-07 58.9 127 33.9
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.2e-07 58.9 127 33.9
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 5.2e-07 58.9 150 27.3
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 6.8e-07 58.5 152 27.6
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 6.8e-07 58.5 145 34.5
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 6.8e-07 58.5 155 27.7
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 1.2e-06 57.8 124 32.3
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.2e-06 57.8 169 23.7
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 1.2e-06 57.8 153 28.8
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.5e-06 57.4 129 28.7
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.5e-06 57.4 118 27.1
Lj4A728G41 Lonicera japonica HOM05D004728 ORTHO05D002375 2.0e-06 57.0 92 38.0
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 2.0e-06 57.0 143 27.3
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 2.6e-06 56.6 167 26.3
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 3.4e-06 56.2 172 25.6
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 3.4e-06 56.2 139 25.9
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 3.4e-06 56.2 120 29.2
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.4e-06 55.8 149 28.9
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 5.8e-06 55.5 166 24.7
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 7.5e-06 55.1 179 24.0
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 7.5e-06 55.1 100 33.0
PSO675G0090 Papaver somniferum HOM05D015253 ORTHO05D023059 7.5e-06 55.1 197 27.4
PSO700G0018 Papaver somniferum HOM05D015253 ORTHO05D002375 7.5e-06 55.1 73 34.2
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 7.5e-06 55.1 128 25.0
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 9.9e-06 54.7 173 24.3
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 9.9e-06 54.7 139 26.6
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 9.9e-06 54.7 179 27.4


User provided reference genes

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